Stem-loop bta-mir-12000

Accession

MI0038383

Description

Bos taurus bta-mir-12000 precursor miRNA

Sequence

1079 reads, 1.0 reads per million, 207 experiments

UCUGCAUCCGAGGACUCAAcccauuugauuggcgguuggUUGAAUCCACAGAUGUGAGACC
((((((((.(.(((.((((((.(((........))).)))))).))).).))))).)))..

Structure

--   -     C A   C      c   uga 
  UCU GCAUC G GGA UCAAcc auu   u
  ||| ||||| | ||| |||||| |||    
  AGA UGUAG C CCU AGUUgg ugg   u
CC   G     A A   A      u   cgg 

Annotation confidence High

Genome context

7: 12356853-12356913 [+]

Mature bta-miR-12000-5p

• Accession: MIMAT0051146
• Description: Bos taurus bta-miR-12000-5p mature miRNA
• Sequence: 1 - UCUGCAUCCGAGGACUCAA - 19
• Evidence: experimental ; Illumina [1]

Mature bta-miR-12000-3p

• Accession: MIMAT0046659
• Description: Bos taurus bta-miR-12000-3p mature miRNA
• Sequence: 40 - UUGAAUCCACAGAUGUGAGACC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884