Stem-loop bta-mir-12004

Accession

MI0038388

Description

Bos taurus bta-mir-12004 precursor miRNA

Sequence

5301 reads, 6.0 reads per million, 236 experiments

CUGGCUCUGGCUCUCUGCCUCCUccuaaccgGAGGGACAGAGAGCCAGGGCC
..(((((((((((((((.(.(((((.....)))))).)))))))))))))))

Structure

CU               C U     u 
  GGCUCUGGCUCUCUG C CCUcc a
  ||||||||||||||| | ||||| a
  CCGGGACCGAGAGAC G GGAGg c
--               A -     c 

Annotation confidence Medium

Genome context

20: 31764932-31764983 [+]

Mature bta-miR-12004-5p

• Accession: MIMAT0046664
• Description: Bos taurus bta-miR-12004-5p mature miRNA
• Sequence: 1 - CUGGCUCUGGCUCUCUGCCUCCU - 23
• Evidence: experimental ; Illumina [1]

Mature bta-miR-12004-3p

• Accession: MIMAT0051149
• Description: Bos taurus bta-miR-12004-3p mature miRNA
• Sequence: 32 - GAGGGACAGAGAGCCAGGGCC - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884