Stem-loop bta-mir-12042

Accession

MI0038465

Description

Bos taurus bta-mir-12042 precursor miRNA

Sequence

3789 reads, 2.0 reads per million, 127 experiments

UGUGUCUUUCCUUCUGUGUGUGCUgcaaaugacuuagagCCACACUGGAGGAGGCACUGU
.(((((..((((((.(((((.(((.............)))))))).)))))))))))...

Structure

--U     UU      U     U   gcaaa 
   GUGUC  UCCUUC GUGUG GCU     u
   |||||  |||||| ||||| |||     g
   CACGG  AGGAGG CACAC Cga     a
UGU     --      U     -   gauuc 

Annotation confidence Medium

Genome context

25: 10372691-10372750 [-]

Mature bta-miR-12042-5p

• Accession: MIMAT0046739
• Description: Bos taurus bta-miR-12042-5p mature miRNA
• Sequence: 1 - UGUGUCUUUCCUUCUGUGUGUGCU - 24
• Evidence: experimental ; Illumina [1]

Mature bta-miR-12042-3p

• Accession: MIMAT0051188
• Description: Bos taurus bta-miR-12042-3p mature miRNA
• Sequence: 40 - CCACACUGGAGGAGGCACUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884