Stem-loop bta-mir-148d

Accession

MI0038395

Description

Bos taurus bta-mir-148d precursor miRNA

Literature search

17 open access papers mention bta-mir-148d
(28 sentences)

Sequence

356076 reads, 469.0 reads per million, 127 experiments

AAAGUUCUGUAGUGCACUGAcuucuaucauauucagAGUCGGAGUGUCUCAGAACUUUGcc
(((((((((.(((((.(((((((............))))))).))).)))))))))))...

Structure

---         U  -   A       cuauc 
   AAAGUUCUG AG UGC CUGAcuu     a
   ||||||||| || ||| |||||||      
   UUUCAAGAC UC GUG GGCUGAg     u
ccG         -  U   A       acuua 

Annotation confidence Medium

Genome context

4: 69949482-69949542 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-148d

Mature bta-miR-148d-5p

• Accession: MIMAT0046670
• Description: Bos taurus bta-miR-148d-5p mature miRNA
• Sequence: 1 - AAAGUUCUGUAGUGCACUGA - 20
• Evidence: experimental ; Illumina [1]

Mature bta-miR-148d-3p

• Accession: MIMAT0051153
• Description: Bos taurus bta-miR-148d-3p mature miRNA
• Sequence: 37 - AGUCGGAGUGUCUCAGAACUUUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884