Stem-loop bta-mir-2285ck

Accession

MI0038401

Description

Bos taurus bta-mir-2285ck precursor miRNA

Literature search

11 open access papers mention bta-mir-2285ck
(15 sentences)

Sequence

4062 reads, 2.0 reads per million, 273 experiments

UGGCCAAAAUCUUUGUUUCAGUuuuuccauaacaguaugccaaacacUCGAACAAACUUUUUGGCCAAC
(((((((((..(((((((.((((((..((((....))))..))).))).)))))))..)))))))))..

Structure

--         UC       C   -   uc    a 
  UGGCCAAAA  UUUGUUU AGU uuu  caua c
  |||||||||  ||||||| ||| |||  ||||  
  ACCGGUUUU  AAACAAG Uca aaa  guau a
CA         UC       C   c   cc    g 

Annotation confidence High

Genome context

16: 44910390-44910458 [+]

Mature bta-miR-2285ck-5p

• Accession: MIMAT0046676
• Description: Bos taurus bta-miR-2285ck-5p mature miRNA
• Sequence: 1 - UGGCCAAAAUCUUUGUUUCAGU - 22
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285ck-3p

• Accession: MIMAT0051158
• Description: Bos taurus bta-miR-2285ck-3p mature miRNA
• Sequence: 48 - UCGAACAAACUUUUUGGCCAAC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884