Stem-loop bta-mir-12005-2

Accession

MI0038391

Description

Bos taurus bta-mir-12005-2 precursor miRNA

Sequence

1009 reads, 1.0 reads per million, 165 experiments

CUCCCCUUAAGGACUUCAUAgaauaugauauuuaaaUAUGAAGUCCUUAAGGGGAGGGU
(((((((((((((((((((((((((...)))))...))))))))))))))))))))...

Structure

---                    ---     u 
   CUCCCCUUAAGGACUUCAUA   gaaua  
   ||||||||||||||||||||   ||||| g
   GAGGGGAAUUCCUGAAGUAU   uuuau  
UGG                    aaa     a 

Annotation confidence High

Genome context

5: 38144437-38144495 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-12005-2

Mature bta-miR-12005-2-5p

• Accession: MIMAT0060925
• Description: Bos taurus bta-miR-12005-2-5p mature miRNA
• Sequence: 1 - CUCCCCUUAAGGACUUCAUA - 20
• Evidence: experimental ; Illumina [1]

Mature bta-miR-12005-3p

• Accession: MIMAT0046666
• Description: Bos taurus bta-miR-12005-3p mature miRNA
• Sequence: 37 - UAUGAAGUCCUUAAGGGGAGGGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884