miRBase entry: bta-mir-191b

Stem-loop bta-mir-191b


Accession
MI0038464
Description
Bos taurus bta-mir-191b precursor miRNA


Sequence

892068 reads, 4 reads per million, 77 experiments
GAACGAAAUCCAAGCGCAGCUGgaaugcucuggagacaacagcugcuuuugggauuccguugcc
.((((.((((((((.(((((((.....((....))....))))))).))).))))).))))...

Structure
--G    A     -   C       gaaug  c 
   AACG AAUCC AAG GCAGCUG     cu u
   |||| ||||| ||| |||||||     ||  
   uugc uuagg uuu cgucgac     ga g
ccg    c     g   u       -aaca  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr22: 51727536-51727599 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bta-mir-191b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-191b

Accession MIMAT0046738
Description Bos taurus bta-miR-191b mature miRNA
Sequence 1 - GAACGAAAUCCAAGCGCAGCUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884