miRBase entry: bta-mir-11986b

Stem-loop bta-mir-11986b


Accession
MI0038345
Description
Bos taurus bta-mir-11986b precursor miRNA


Sequence

107184 reads, 52.0 reads per million, 308 experiments
UUUUCCAAUGAGUUAGUCCUUUgggcacugaugcgaAGAACUAACUCAUUGGAAGAG
(((((((((((((((((.(((((.(......).))))).))))))))))))))))).

Structure
-                 C     g ca 
 UUUUCCAAUGAGUUAGU CUUUg g  c
 ||||||||||||||||| ||||| |   
 AGAAGGUUACUCAAUCA GAagc u  u
G                 A     g ag 


Annotation confidence High
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Genome context
20: 10264043-10264099 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-11986b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-11986b-5p

Accession MIMAT0046621
Description Bos taurus bta-miR-11986b-5p mature miRNA
Sequence 1 - UUUUCCAAUGAGUUAGUCCUUU - 22
Evidence experimental
Illumina [1]

Mature bta-miR-11986b-3p

Accession MIMAT0051122
Description Bos taurus bta-miR-11986b-3p mature miRNA
Sequence 37 - AGAACUAACUCAUUGGAAGAG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884