Stem-loop bta-mir-6501

Accession

MI0038410

Description

Bos taurus bta-mir-6501 precursor miRNA

Literature search

1 open access papers mention bta-mir-6501
(1 sentences)

Sequence

1115 reads, 1.0 reads per million, 170 experiments

AGUUGCCAGGGCUGCCUGCAGUGACAacagcaguagaguugCCAGGGCAGCCUGUGGUAACAGU
.((((((((((((((((...(((((.((....))...)))))..))))))))).)))))))...

Structure

--A       -         GCA     --A  a 
   GUUGCCA GGGCUGCCU   GUGAC   ac g
   ||||||| |||||||||   |||||   ||  
   CAAUGGU UCCGACGGG   Cguug   ug c
UGA       G         -AC     aga  a 

Annotation confidence High

Genome context

1: 1978829-1978892 [-]

Mature bta-miR-6501-5p

• Accession: MIMAT0051163
• Description: Bos taurus bta-miR-6501-5p mature miRNA
• Sequence: 1 - AGUUGCCAGGGCUGCCUGCAGUGACA - 26
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6501-3p

• Accession: MIMAT0046685
• Description: Bos taurus bta-miR-6501-3p mature miRNA
• Sequence: 42 - CCAGGGCAGCCUGUGGUAACAGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884