Stem-loop bta-mir-2285ch

Accession

MI0038396

Description

Bos taurus bta-mir-2285ch precursor miRNA

Literature search

11 open access papers mention bta-mir-2285ch
(15 sentences)

Sequence

2344 reads, 2.0 reads per million, 284 experiments

uGGCCAAAAAGUUCGUUUGagcuuucuuauaccauggaaaAUCAAUGAACUUUUUGGCCAGC
(((((((((((((((((.((..(((((........))))).)))))))))))))))))))..

Structure

--                 U  gc     uau 
  uGGCCAAAAAGUUCGUU Ga  uuucu   a
  ||||||||||||||||| ||  |||||    
  ACCGGUUUUUCAAGUAA CU  aaagg   c
CG                 -  -A     uac 

Annotation confidence Medium

Genome context

1: 122302967-122303028 [+]

Mature bta-miR-2285ch-5p

• Accession: MIMAT0051154
• Description: Bos taurus bta-miR-2285ch-5p mature miRNA
• Sequence: 2 - GGCCAAAAAGUUCGUUUG - 19
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285ch-3p

• Accession: MIMAT0046671
• Description: Bos taurus bta-miR-2285ch-3p mature miRNA
• Sequence: 41 - AUCAAUGAACUUUUUGGCCAGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884