Stem-loop sequence bta-mir-2285bq

Accession

MI0038359 (change log)

Description

Bos taurus miR-2285bq stem-loop

Literature search

11 open access papers mention bta-mir-2285bq
(15 sentences)

Stem-loop

   ----aaau        a      c  acaac 
5'         guucauuc gguuuu cu     a
           |||||||| |||||| ||      
3'         caaguaag ccaaaa ga     u
   cgguucuu        c      a  cauuc 

Deep sequencing

4595 reads, 164 reads per million, 66 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr6: 23736734-23736793 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038359

Mature sequence bta-miR-2285bq

• Accession: MIMAT0046635
• Sequence: 38 - aaaacccgaaugaacuucuuggc - 60
• Deep sequencing: 4577 reads, 77 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).