Stem-loop sequence bta-mir-2285cl

Accession

MI0038406 (change log)

Description

Bos taurus miR-2285cl stem-loop

Literature search

11 open access papers mention bta-mir-2285cl
(15 sentences)

Stem-loop

   --u       a   -        -a g   g 
5'    aaaguuc uuc ggguuuuu  u uag a
      ||||||| ||| ||||||||  | |||  
3'    uuucaag gag cccaaaaa  g auu u
   auu       -   a        ag g   c 

Deep sequencing

162 reads, 0 reads per million, 18 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr28: 33612084-33612142 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038406

Mature sequence bta-miR-2285cl

• Accession: MIMAT0046681
• Sequence: 1 - uaaaguucauucggguuuuu - 20
• Deep sequencing: 101 reads, 23 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).