Stem-loop sequence bta-mir-2285dj

Accession

MI0038473 (change log)

Description

Bos taurus miR-2285dj stem-loop

Literature search

11 open access papers mention bta-mir-2285dj
(15 sentences)

Stem-loop

   --           ca     guc    a a 
5'   gaaaguuuguu  gguuu   ccca g u
     |||||||||||  |||||   |||| |  
3'   uuuucaaacaa  ccaaa   gggu c g
   gu           ac     --a    a u 

Deep sequencing

21 reads, 0 reads per million, 11 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr13: 10496152-10496209 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038473

Mature sequence bta-miR-2285dj

• Accession: MIMAT0046747
• Sequence: 1 - gaaaguuuguucagguuuguccc - 23
• Deep sequencing: 10 reads, 7 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).