Stem-loop bta-mir-1949

Accession

MI0038481

Description

Bos taurus bta-mir-1949 precursor miRNA

Literature search

1 open access papers mention bta-mir-1949
(2 sentences)

Sequence

6146 reads, 3.0 reads per million, 215 experiments

CUGGUUGGCAUUCUGGGCCUgguucaugccuacucuguuauuaacUAUACCAGGAUGCCAGCAUAGUU
((((((((((((((((...(((((.(((.(......).))).)))))..))))))))))))).)))..

Structure

--   -             GCC     c   c ua 
  CUG GUUGGCAUUCUGG   Ugguu aug c  c
  ||| |||||||||||||   ||||| ||| |   
  GAU CGACCGUAGGACC   AUcaa uau g  u
UU   A             -AU     u   u uc 

Annotation confidence Medium

Genome context

7: 50582819-50582886 [+]

Mature bta-miR-1949-5p

• Accession: MIMAT0051194
• Description: Bos taurus bta-miR-1949-5p mature miRNA
• Sequence: 1 - CUGGUUGGCAUUCUGGGCCU - 20
• Evidence: experimental ; Illumina [1]

Mature bta-miR-1949-3p

• Accession: MIMAT0046755
• Description: Bos taurus bta-miR-1949-3p mature miRNA
• Sequence: 46 - UAUACCAGGAUGCCAGCAUAGUU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884