Stem-loop gga-mir-132b

Accession

MI0040693

Description

Gallus gallus gga-mir-132b precursor miRNA

Literature search

4 open access papers mention gga-mir-132b
(4 sentences)

Sequence

50352 reads, 1 reads per million, 5 experiments

ACCAUGGCUGUAGACUGUUACccccccagcagcacagUAACAAUCUAAAGCCACGGUCG
(((.(((((.((((.((((((...............)))))).)))).))))).)))..

Structure

--   A     G    C      cccccc 
  ACC UGGCU UAGA UGUUAC      a
  ||| ||||| |||| ||||||      g
  UGG ACCGA AUCU ACAAUg      c
GC   C     A    A      acacga 

Annotation confidence Not enough data

Genome context

chr19: 5515205-5515263 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-132b

Mature gga-miR-132b-5p

• Accession: MIMAT0049952
• Description: Gallus gallus gga-miR-132b-5p mature miRNA
• Sequence: 1 - ACCAUGGCUGUAGACUGUUAC - 21
• Evidence: experimental ; Illumina [1]

Mature gga-miR-132b-3p

• Accession: MIMAT0049953
• Description: Gallus gallus gga-miR-132b-3p mature miRNA
• Sequence: 38 - UAACAAUCUAAAGCCACGGUCG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973