Stem-loop gga-mir-212

Accession

MI0040694

Description

Gallus gallus gga-mir-212 precursor miRNA

Literature search

1 open access papers mention gga-mir-212
(1 sentences)

Sequence

21304 reads, 227 reads per million, 5 experiments

ACCUUGGCUCUAGACUGCUUACUgcugcguagggacaggacagUAACAGUCUACAGUCAUGGCUa
.((.(((((.(((((((.((((((((((.....).)))..))))))))))))).))))).))...

Structure

--A  U     C       C      --   - g 
   CC UGGCU UAGACUG UUACUg  cug c u
   || ||||| ||||||| ||||||  ||| | a
   GG ACUGA AUCUGAC AAUgac  gac g g
aUC  U     C       -      ag   a g 

Annotation confidence High

Genome context

chr19: 5515770-5515834 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-212

Mature gga-miR-212-5p

• Accession: MIMAT0049954
• Description: Gallus gallus gga-miR-212-5p mature miRNA
• Sequence: 1 - ACCUUGGCUCUAGACUGCUUACU - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-212-3p

• Accession: MIMAT0049955
• Description: Gallus gallus gga-miR-212-3p mature miRNA
• Sequence: 44 - UAACAGUCUACAGUCAUGGCU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973