Stem-loop gga-mir-132c

Accession

MI0040695

Description

Gallus gallus gga-mir-132c precursor miRNA

Literature search

4 open access papers mention gga-mir-132c
(4 sentences)

Sequence

21229 reads, 13 reads per million, 5 experiments

AGCCAUGACUGUAGACUGUUACUguccugucccuacgcagCAGUAAGCAGUCUAGAGCCAAGgugc
.(((.((.((.(((((((((((((..((((......)))))))).))))))))).)).)).)))..

Structure

-A   A  A  G         -    uc    cc 
  GCC UG CU UAGACUGUU ACUg  cugu  c
  ||| || || ||||||||| ||||  ||||   
  ugG AC GA AUCUGACGA UGAC  gacg  u
cg   A  C  G         A    --    ca 

Annotation confidence Not enough data

Genome context

chr19: 5515771-5515836 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-132c

Mature gga-miR-132c-5p

• Accession: MIMAT0049956
• Description: Gallus gallus gga-miR-132c-5p mature miRNA
• Sequence: 1 - AGCCAUGACUGUAGACUGUUACU - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-132c-3p

• Accession: MIMAT0049957
• Description: Gallus gallus gga-miR-132c-3p mature miRNA
• Sequence: 41 - CAGUAAGCAGUCUAGAGCCAAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973