Stem-loop gga-mir-205c

Accession

MI0040717

Description

Gallus gallus gga-mir-205c precursor miRNA

Literature search

2 open access papers mention gga-mir-205c
(2 sentences)

Sequence

91 reads, 4 reads per million, 5 experiments

GCUUCACUCCACUGAAAUCUGGuuagguacgagacaGACUCCGGUGGAAUGAAGGAca
.(((((.(((((((...((((.............))))...))))))).)))))....

Structure

---G     C       AAA    Guuag 
    CUUCA UCCACUG   UCUG     g
    ||||| |||||||   ||||     u
    GAAGU AGGUGGC   AGac     a
acAG     A       CUC    agagc 

Annotation confidence Not enough data

Genome context

chr26: 3076089-3076146 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-205c

Mature gga-miR-205c-5p

• Accession: MIMAT0049995
• Description: Gallus gallus gga-miR-205c-5p mature miRNA
• Sequence: 1 - GCUUCACUCCACUGAAAUCUGG - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-205c-3p

• Accession: MIMAT0049996
• Description: Gallus gallus gga-miR-205c-3p mature miRNA
• Sequence: 37 - GACUCCGGUGGAAUGAAGGA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973