miRBase entry: gga-mir-210b

Stem-loop gga-mir-210b

Accession

MI0040748

Description

Gallus gallus gga-mir-210b precursor miRNA

Literature search

4 open access papers mention gga-mir-210b
(51 sentences)

Sequence

5449 reads, 0 reads per million, 5 experiments

UUAGCCGCUGUCACACGCACaguggagucgccgagagcacaAUGUGCGUUAGUCAGUGGCUCa
..((((((((.(..(((((((.((...((.....))...)).)))))))..).))))))))..

Structure

UU        U AC       g  gag  g 
  AGCCGCUG C  ACGCACa ug   uc c
  |||||||| |  ||||||| ||   || c
  UCGGUGAC G  UGCGUGU ac   ag g
aC        U AU       A  acg  a

Annotation confidence Not enough data

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Genome context

chr5: 15887076-15887138 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-210b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature gga-miR-210b-5p

Accession	MIMAT0050054
Description	Gallus gallus gga-miR-210b-5p mature miRNA
Sequence	1 - UUAGCCGCUGUCACACGCAC - 20
Evidence	experimental Illumina [1]

Mature gga-miR-210b-3p

Accession	MIMAT0050055
Description	Gallus gallus gga-miR-210b-3p mature miRNA
Sequence	42 - AUGUGCGUUAGUCAGUGGCUC - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 29079676
Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
"Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
Genome Res (2017) 12:1961-1973