Stem-loop gga-mir-129-1

Accession

MI0040749

Description

Gallus gallus gga-mir-129-1 precursor miRNA

Literature search

3 open access papers mention gga-mir-129-1
(10 sentences)

Sequence

262315 reads, 2790 reads per million, 5 experiments

CUUUUUGCGGUCUGGGCUUGCuguacauaacuaccuacccgggAAGCCCUUACCCCAAAAAGCAUu
(((((((.(((..((((((.(((................))).))))))..))).)))))))....

Structure

----       C   CU      G   uacauaa 
    CUUUUUG GGU  GGGCUU Cug       c
    ||||||| |||  |||||| |||        
    GAAAAAC CCA  CCCGAA ggc       u
uUAC       C   UU      g   ccaucca 

Annotation confidence High

Genome context

chr5: 21516911-21516976 [+]

Mature gga-miR-129-5p

• Accession: MIMAT0050056
• Description: Gallus gallus gga-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGC - 21
• Evidence: experimental ; Illumina [1]

Mature gga-miR-129-1-3p

• Accession: MIMAT0050057
• Description: Gallus gallus gga-miR-129-1-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGCAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973