Stem-loop sequence gga-mir-214b

AccessionMI0040752 (change log)
DescriptionGallus gallus miR-214b stem-loop
Stem-loop 
   -           ug c      a    ugag 
5'  cugccugucug  c ugcugu cagg    a
    |||||||||||  | |||||| ||||    g
3'  gacggacagau  g acgaca gucu    g
   a           gu a      c    ugua
Get sequence
Deep sequencing
230 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr8: 4658340-4658403 [-]
intergenic
Clustered miRNAs
< 10kb from gga-mir-214b
gga-mir-214bchr8: 4658340-4658403 [-]
gga-mir-214chr8: 4658313-4658422 [+]
gga-mir-199-2chr8: 4652464-4652571 [+]
Database links

Mature sequence gga-miR-214b-5p

Accession MIMAT0050062
Sequence

2 -  

ugccugucugugccugcuguac

 - 23

Get sequence
Deep sequencing29 reads, 4 experiments
Evidence experimental; Illumina [1]

Mature sequence gga-miR-214b-3p

Accession MIMAT0050063
Sequence

42 -  

cacagcaaguguagacaggca

 - 62

Get sequence
Deep sequencing200 reads, 5 experiments
Evidence experimental; Illumina [1]

References

1
PMID:29079676 "Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation" Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H Genome Res. [Epub prior to print](2017).