miRBase entry: gga-mir-12283

Stem-loop gga-mir-12283


Accession
MI0040755
Description
Gallus gallus gga-mir-12283 precursor miRNA


Sequence

25 reads, 0 reads per million, 4 experiments
UGGGGAGGAUAGGGAGAAAGGGUgcugcacguccccugggucuuaauUCUUCUCUCUGUCUUUCUCAGg
((((((((((((((((((((((.((.....)).))))............))))))))))))))))))..

Structure
--                  ------------    U  u 
  UGGGGAGGAUAGGGAGAA            AGGG gc g
  ||||||||||||||||||            |||| || c
  ACUCUUUCUGUCUCUCUU            uccc ug a
gG                  CUuaauucuggg    c  c 


Annotation confidence Not enough data
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Genome context
chr9: 914529-914597 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-12283
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-12283-5p

Accession MIMAT0050067
Description Gallus gallus gga-miR-12283-5p mature miRNA
Sequence 1 - UGGGGAGGAUAGGGAGAAAGGGU - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12283-3p

Accession MIMAT0050068
Description Gallus gallus gga-miR-12283-3p mature miRNA
Sequence 48 - UCUUCUCUCUGUCUUUCUCAG - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973