Stem-loop mdo-mir-12349

Accession

MI0040868

Description

Monodelphis domestica mdo-mir-12349 precursor miRNA

Sequence

91 reads, 2 reads per million, 4 experiments

gggugaugcuucagguucucccugaaaugucggcaAGAGAACUCGAAGGAUCCCCGA
(((.(((.((((.(((((((.((((....))))...))))))).)))).))))))..

Structure

--   u   g    a       --c    a 
  ggg gau cuuc gguucuc   cuga a
  ||| ||| |||| |||||||   ||||  
  CCC CUA GAAG UCAAGAG   ggcu u
AG   -   G    C       Aac    g 

Annotation confidence Not enough data

Genome context

chr4: 226228925-226228981 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-12349

Mature mdo-miR-12349-3p

• Accession: MIMAT0050248
• Description: Monodelphis domestica mdo-miR-12349-3p mature miRNA
• Sequence: 36 - AGAGAACUCGAAGGAUCCCCGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973