miRBase entry: mdo-mir-12375

Stem-loop mdo-mir-12375


Accession
MI0040906
Description
Monodelphis domestica mdo-mir-12375 precursor miRNA


Sequence

22 reads, 1 reads per million, 5 experiments
CCUCCCCCAUGCUUCUAGAGGGCccuagucggccguaagggACCCGGAAGUGUGGGGGGGUCguc
.(((((((((((((((...(((((((...........)))).)))))))))))))))))).....

Structure
----C               AGA   -    aguc 
     CUCCCCCAUGCUUCU   GGG Cccu    g
     |||||||||||||||   ||| ||||    g
     GGGGGGGUGUGAAGG   CCC ggga    c
cugCU               ---   A    augc 


Annotation confidence Not enough data
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Genome context
chr6: 85995680-85995744 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12375
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12375-5p

Accession MIMAT0050315
Description Monodelphis domestica mdo-miR-12375-5p mature miRNA
Sequence 1 - CCUCCCCCAUGCUUCUAGAGGGC - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-12375-3p

Accession MIMAT0050316
Description Monodelphis domestica mdo-miR-12375-3p mature miRNA
Sequence 42 - ACCCGGAAGUGUGGGGGGGUC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973