miRBase entry: mdo-mir-12387

Stem-loop mdo-mir-12387


Accession
MI0040920
Description
Monodelphis domestica mdo-mir-12387 precursor miRNA


Sequence

56 reads, 3 reads per million, 3 experiments
aUGGGAGGGAGAUGGAGGGGCAGCagagcagaccugugcuugguccUGACCCUACUUCUCCGCCCAGg
.((((..(((((.(.((((.(((..(((((......)))))....))).)))).).))))).))))..

Structure
-a    AG     U G    G   --Ca     ga 
  UGGG  GGAGA G AGGG CAG    gagca  c
  ||||  ||||| | |||| |||    |||||   
  ACCC  CCUCU C UCCC GUc    uucgu  c
gG    -G     U A    A   cugg     gu 


Annotation confidence Not enough data
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Genome context
chr7: 174477520-174477587 [+]

Database links

Mature mdo-miR-12387-5p

Accession MIMAT0050338
Description Monodelphis domestica mdo-miR-12387-5p mature miRNA
Sequence 2 - UGGGAGGGAGAUGGAGGGGCAGC - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-12387-3p

Accession MIMAT0050339
Description Monodelphis domestica mdo-miR-12387-3p mature miRNA
Sequence 47 - UGACCCUACUUCUCCGCCCAG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973