miRBase entry: mdo-mir-7394c

Stem-loop mdo-mir-7394c


Accession
MI0040982
Description
Monodelphis domestica mdo-mir-7394c precursor miRNA


Sequence

14 reads, 1 reads per million, 3 experiments
ACACAUAUGCCCAGGUGACAUGcuguucuacaUGUGACCUCACCAUAUGUGUU
(((((((((...((((.(((((........))))).))))...))))))))).

Structure
-         CCC    G     cug 
 ACACAUAUG   AGGU ACAUG   u
 |||||||||   |||| |||||    
 UGUGUAUAC   UCCA UGUac   u
U         CAC    G     auc 


Annotation confidence Not enough data
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Genome context
chrX: 47667188-47667240 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mdo-mir-7394c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7394c-5p

Accession MIMAT0050440
Description Monodelphis domestica mdo-miR-7394c-5p mature miRNA
Sequence 1 - ACACAUAUGCCCAGGUGACAUG - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7394c-3p

Accession MIMAT0050441
Description Monodelphis domestica mdo-miR-7394c-3p mature miRNA
Sequence 33 - UGUGACCUCACCAUAUGUGUU - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973