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20 publications mentioning zma-MIR319c

Open access articles that are associated with the species Zea mays and mention the gene name MIR319c. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 38
Other miRNAs from this paper: zma-MIR156d, zma-MIR156f, zma-MIR156g, zma-MIR156b, zma-MIR156c, zma-MIR156e, zma-MIR156a, zma-MIR156h, zma-MIR156i, zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR167a, zma-MIR167b, zma-MIR167d, zma-MIR167c, zma-MIR160e, zma-MIR166a, zma-MIR162, zma-MIR166h, zma-MIR166e, zma-MIR166i, zma-MIR166f, zma-MIR166g, zma-MIR166b, zma-MIR166c, zma-MIR166d, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, zma-MIR394a, zma-MIR394b, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR399a, zma-MIR399c, zma-MIR399b, zma-MIR399d, zma-MIR399e, zma-MIR399f, zma-MIR156j, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR319a, zma-MIR319b, zma-MIR319d, zma-MIR166k, zma-MIR166j, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR168a, zma-MIR168b, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR172e, zma-MIR166l, zma-MIR166m, zma-MIR393a, zma-MIR408a, zma-MIR156k, zma-MIR160f, zma-MIR2118a, zma-MIR2118b, zma-MIR2118c, zma-MIR2118d, zma-MIR2118e, zma-MIR2118f, zma-MIR2118g, zma-MIR2275a, zma-MIR2275b, zma-MIR2275c, zma-MIR2275d, zma-MIR156l, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR166n, zma-MIR167j, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR393b, zma-MIR393c, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, zma-MIR397a, zma-MIR397b, zma-MIR398a, zma-MIR398b, zma-MIR399g, zma-MIR399h, zma-MIR399i, zma-MIR399j, zma-MIR408b, zma-MIR482, zma-MIR528a, zma-MIR528b, zma-MIR529, zma-MIR827, zma-MIR1432, zma-MIR444a, zma-MIR444b
In this report, MiR159, miR169 and miR319 were all down-regulated with miR159 being down-regulated by 7.7 folds, the most down-regulated miRNA family in imbibed seed. [score:10]
MiR159 and miR319 showed high similarity in mature miRNA sequences, their target motifs were highly conserved in cereal and Arabidopsis GAMYB genes, and they often shared same target genes. [score:5]
These 17 targets were targets of 11 miRNA families (miR156, miR164, miR166, miR167, miR168, miR169, miR319, miR393, miR408, miR528 and zma-miRn6). [score:5]
A-K represented the expression profiles of some predicted target genes of miR156, miR164, miR166, miR167, miR168, miR169, miR319, miR393, miR408, miR528 and zma-miRn6 in dry and imbibed seeds, respectively. [score:5]
The 12 down-regulated miRNA families were miR156, miR159, miR164, miR166, miR167, miR168, miR169, miR172, miR319, miR393, miR394 and miR397. [score:4]
GRMZM2G028054, a member of MYB family, was target gene of both miR159 and miR319. [score:3]
RMZM2G139688 and GRMZM2G028054 were predicted as target genes of both miR159 and miR319 in this study. [score:3]
Zma-miR319/miR159 cleavage site in GRMZM2G028054_T01 mRNAs determined by 5'-RLM-RACE. [score:1]
Upon seed germination, ABA level decreases, so are the abundances of miR159, mi169 and miR319. [score:1]
To validate conserved miRNAs identified and novel ones predicted, quantitative RT-PCR (qRT-PCR) was performed on 10 randomly selected miRNAs, miR156, miR159, miR166, miR167, miR319, miR408, miR528, zma-miRn6, zma-miRn15 and zma-miRn37 in dry and imbibed seed. [score:1]
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2
[+] score: 22
The first includes miR160, miR164, miR167, miR169, miR172, and miR319, which target transcription factors involved in further regulation of gene expression and signal transduction. [score:6]
Six miRNAs (miR160, miR168, miR169, miR319, miR395, and miR399) were identified to be differentially expressed in roots in response to the transient low N condition and all of them were up-regulated (Table S2). [score:6]
With regards to tissue specificity(or tissue dependent), some miRNAs were only regulated in roots or leaves, such as miR160, miR167, miR168, miR319 and miR395 in roots, and miR164, miR172, miR397, miR398 and miR827 in leaves, while some others were regulated in both tissues, such as miR169, miR399, miR408 and miR528 (Fig. 4). [score:3]
106.044792 45 Schommer C Palatnik JF Aggarwal P Chételat A Cubas P 2008 Control of Jasmonate Biosynthesis and Senescence by miR319 Targets. [score:3]
MiR319 has eight potential target genes including two TCP and two MYB transcription factor genes. [score:2]
Nine miRNA families (miR164, miR169, miR172, miR397, miR398, miR399, miR408, miR528, and miR827) were identified in leaves, and nine miRNA families (miR160, miR167, miR168, miR169, miR319, miR395, miR399, miR408, and miR528) identified in roots. [score:1]
Three miRNAs (miR160, miR168, miR319) were identified in roots from the transient response in addition to the chronic response (Table S2). [score:1]
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3
[+] score: 18
Moreover, miRNAs of at least 2 times expression level higher in seeds were all from miR319, miR171 and miR166 family (Figure 3, Additional file 2), indicating the important roles of these miRNAs in seed development. [score:4]
In maize, miR319 was predicted to target several transcription factors including MYB and TCP domain proteins [24]. [score:3]
Both deep-sequencing and miRNA microarray suggested that miR319, miR166 and miR167 were highly expressed in the developing seeds. [score:3]
Our result indicated that the zma-miR319a/b/c/d and zma-miR169o were detected only in seeds, with 42 and 124 reads respectively, similar with miR319 expression in the developing seeds reported previously [26]. [score:3]
MiR319 targets several TCP transcription factors in Arabidopsis[28] and can affects seed size. [score:2]
Several studies also revealed that miR319c, rather than miR319a/b, played a important role in Arabidopsis leaf development [28- 30]. [score:2]
The sequences of miR159 and miR319 are nearly identical and both can affect seed size. [score:1]
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4
[+] score: 15
Other miRNAs from this paper: zma-MIR156d, zma-MIR156f, zma-MIR156g, zma-MIR156b, zma-MIR156c, zma-MIR156e, zma-MIR156a, zma-MIR156h, zma-MIR156i, zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR167a, zma-MIR167b, zma-MIR167d, zma-MIR167c, zma-MIR160e, zma-MIR166a, zma-MIR166h, zma-MIR166e, zma-MIR166i, zma-MIR166f, zma-MIR166g, zma-MIR166b, zma-MIR166c, zma-MIR166d, zma-MIR171a, zma-MIR171b, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, zma-MIR171d, zma-MIR171f, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR396b, zma-MIR396a, zma-MIR399a, zma-MIR399c, zma-MIR399b, zma-MIR399d, zma-MIR399e, zma-MIR399f, zma-MIR156j, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR319a, zma-MIR319b, zma-MIR319d, zma-MIR166k, zma-MIR166j, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR168a, zma-MIR168b, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR171c, zma-MIR171j, zma-MIR171e, zma-MIR171i, zma-MIR171g, zma-MIR172e, zma-MIR166l, zma-MIR166m, zma-MIR171k, zma-MIR171h, zma-MIR408a, zma-MIR156k, zma-MIR160f, zma-MIR396c, zma-MIR396d, zma-MIR156l, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR166n, zma-MIR167j, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR171l, zma-MIR171m, zma-MIR171n, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, zma-MIR396e, zma-MIR396f, zma-MIR396g, zma-MIR396h, zma-MIR399g, zma-MIR399h, zma-MIR399i, zma-MIR399j, zma-MIR408b, zma-MIR1432
Other targets of miR319 might also be involved in the thickening of cell walls in the fibrous bast material during the elongation phase in ramie (Boehmeria nivea; Wang et al., 2014), and in cell proliferation (Schommer et al., 2014), stress-response regulation (Sunkar and Zhu, 2004), and photomorphogenesis in Arabidopsis (Tsai et al., 2014). [score:4]
In the first group of miRNAs, seven known miRNA families (miR1432, miR319, miR408, miR4366, miR8155, miR9773, and miR9774) were up-regulated in the maize library BP3–BN3. [score:4]
In addition, other miRNAs that are differentially expressed at the maize V3 stage, such as miR319, miR4366, miR8155, miR9773, and miR9774, were not detected in the later leaf and root stages in rice. [score:3]
The target gene of miR319, the transcription factor TCP1, is related to the S RNA (NSs) of the Groundnut bud necrosis virus (GBNV) in tomato (Goswami et al., 2012). [score:3]
Leaf-curling symptoms in plants infected with Tomato leaf curl virus (ToLCV) might also be associated with miR319 (Naqvi et al., 2010). [score:1]
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5
[+] score: 15
Further investigation indicated that these tandem miRNAs also exhibited altered expression patterns during kernel and endosperm development, e. g., both Zma-miR319.1 and Zma-miR169.1 were predominantly expressed in 0, 3, and 5 DAP kernels, whereas Zma-miR159.1 and Zma-miR2001.1 were preferentially expressed in endosperms (Figures 5B–E). [score:6]
For example, the expression level of Zma-miR319.1 gradually increased in 0-, 3-, and 5-DAP kernels, unlike the expression pattern of Zma-miR319. [score:5]
In contrast to the observation in the kernels, Zma-miR319.1 exhibited a higher expression level in developing endosperms than that of Zma-miR319 (Figure 5B). [score:3]
Zma-miR169& Zma-miR169.1, Zma-miR319 and Zma-miR319.1, Zma-miR2001 and Zma-miR2001.1, Zma-miR2013 and Zma-miR2013.1 were generated from a single precursor. [score:1]
[1 to 20 of 4 sentences]
6
[+] score: 15
Other miRNAs from this paper: zma-MIR156d, zma-MIR156f, zma-MIR156g, zma-MIR156b, zma-MIR156c, zma-MIR156e, zma-MIR156a, zma-MIR156h, zma-MIR156i, zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR167a, zma-MIR167b, zma-MIR167d, zma-MIR167c, zma-MIR160e, zma-MIR171a, zma-MIR171b, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, zma-MIR171d, zma-MIR171f, zma-MIR394a, zma-MIR394b, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR396b, zma-MIR396a, zma-MIR399a, zma-MIR399c, zma-MIR399b, zma-MIR399d, zma-MIR399e, zma-MIR399f, zma-MIR156j, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR319a, zma-MIR319b, zma-MIR319d, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR171c, zma-MIR171j, zma-MIR171e, zma-MIR171i, zma-MIR171g, zma-MIR172e, zma-MIR171k, zma-MIR171h, zma-MIR408a, zma-MIR156k, zma-MIR160f, zma-MIR396c, zma-MIR396d, zma-MIR156l, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR167j, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR171l, zma-MIR171m, zma-MIR171n, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, zma-MIR396e, zma-MIR396f, zma-MIR396g, zma-MIR396h, zma-MIR399g, zma-MIR399h, zma-MIR399i, zma-MIR399j, zma-MIR408b, zma-MIR529
Five TEOSINTE BRANCHED/CYCLOIDEA/PCF (TCPs) transcription factors were regulated by miR319 and function in leaf developmental regulation [19– 21]. [score:4]
MiR164 and miR319 were identified to target ORE1 and TCP transcription factors, and both are negative regulators of leaf aging [17– 22]. [score:4]
Meanwhile, TCPs directly regulate lipoxygenase 2 (LOX2), which encodes a key enzyme of JA biosynthesis, and a high level of miR319 leads to delayed leaf senescence in Arabidopsis [22]. [score:3]
Schommer C, Palatnik JF, Aggarwal P, Chetelat A, Cubas P, Farmer EE, Nath U, Weigel D. Control of jasmonate biosynthesis and senescence by miR319 targets. [score:3]
MiR319 is a senescence -associated miRNA that represses the onset of senescence. [score:1]
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7
[+] score: 12
Other miRNAs from this paper: zma-MIR156d, zma-MIR156f, zma-MIR156g, zma-MIR156b, zma-MIR156c, zma-MIR156e, zma-MIR156a, zma-MIR156h, zma-MIR156i, zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR167a, zma-MIR167b, zma-MIR167d, zma-MIR167c, zma-MIR160e, zma-MIR166a, zma-MIR162, zma-MIR166h, zma-MIR166e, zma-MIR166i, zma-MIR166f, zma-MIR166g, zma-MIR166b, zma-MIR166c, zma-MIR166d, zma-MIR171a, zma-MIR171b, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, zma-MIR171d, zma-MIR171f, zma-MIR394a, zma-MIR394b, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR396b, zma-MIR396a, zma-MIR399a, zma-MIR399c, zma-MIR399b, zma-MIR399d, zma-MIR399e, zma-MIR399f, zma-MIR156j, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR319a, zma-MIR319b, zma-MIR319d, zma-MIR166k, zma-MIR166j, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR168a, zma-MIR168b, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR171c, zma-MIR171j, zma-MIR171e, zma-MIR171i, zma-MIR171g, zma-MIR172e, zma-MIR166l, zma-MIR166m, zma-MIR171k, zma-MIR171h, zma-MIR393a, zma-MIR408a, zma-MIR156k, zma-MIR160f, zma-MIR396c, zma-MIR396d, zma-MIR156l, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR166n, zma-MIR167j, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR171l, zma-MIR171m, zma-MIR171n, zma-MIR393b, zma-MIR393c, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, zma-MIR396e, zma-MIR396f, zma-MIR396g, zma-MIR396h, zma-MIR397a, zma-MIR397b, zma-MIR398a, zma-MIR398b, zma-MIR399g, zma-MIR399h, zma-MIR399i, zma-MIR399j, zma-MIR408b, zma-MIR482, zma-MIR528a, zma-MIR528b, zma-MIR529, zma-MIR827, zma-MIR1432, zma-MIR444a, zma-MIR444b
In addition to these families, target genes of miR169, miR319, miR408 and miR529 were involved in transcription regulation, whereas miR159, miR397, and miR399 target genes were involved in response to stimulus. [score:6]
In contrast, miR156, miR159, miR167, miR168, miR169, miR171, miR319, and miR529 had high expression counts (slightly over 3,000 RPM, on average). [score:3]
The same trend is observed in many other miRNA families including miR164, miR166, miR169, miR171, miR172, miR319 and miR396 as they target various families of transcription factors such as NAM (No Apical Meristem) proteins, bZIP (basic-leucine Zipper) genes, CBF (CCAAT binding factor), GRAS transcription factor, AP2 (APETALA2)-EREBP (Ethylene-Responsive Element Binding Proteins), CCCH type zinc finger protein and TCP (Teosinite branched, Cycloidea, and PCF), GRF transcription factor families respectively [12], [71], [85]– [87]. [score:3]
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8
[+] score: 12
Three miRNAs that likely play key roles in maize stamen development include miR159, which targets gibberellin (GA) -induced MYB (GAMYB) TFs, miR167, which targets auxin response factor (ARF) TFs, and miR319, which targets TCP TFs. [score:8]
MiR159, miR167, and miR319 are reduced ~5, 30 and 7-fold in fzt tassel primordia, respectively, and thus reduction of these miRNAs and misregulation of their target mRNAs are excellent candidates to underlie male sterility in fzt. [score:4]
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9
[+] score: 11
These 13 targets are targeted by 8 miRNA families (miR159, miR164, miR167, miR172, miR319, miR393, miR528, miRn7) (Table S9), which are active participants in the signal transduction at the early stage of hypoxia conditions. [score:5]
miR159 and miR319 shares the target sequence. [score:3]
Both miR159 and miR319 are down regulated in B73 under hypoxia conditions. [score:2]
miR319 and miR159 are highly conserved miRNAs and are involved in plant growth, morphogenesis and reproduction [113]. [score:1]
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10
[+] score: 11
The greatest number of potential targets of Zea mays miRNAs was for the P111 gene targetted by eighteen different miRNAs (miR156j-3p, miR160a-3p, miR164c-3p, miR164h-3p, miR164h-5p, miR166k-5p, miR166l-5p, miR168b-3p, miR171b-5p, miR171f-5p, miR319a-5p, miR319c-5p, miR399h-5p, miR408b-5p, miR444a, miR444b, miR528a-3p, and miR528b-3p), in combination, at a total of 13 loci of P111 gene. [score:5]
miRNAs targeting both P50 and P111 genes at the same loci were miR164c-3p and miR164h-3p (locus 1009), miR171b-5p and miR171f-5p (locus 1300), miR319a-5p and miR319c-5p (locus 1454), miR444a and miR444b (locus 2466), and miR528a-3p and miR528b-3p (locus 1009). [score:3]
For P50 gene of MCMV, 11 targeting miRNAs were predicted (miR160a-3p, miR164c-3p, miR164h-3p, miR166l-5p, miR171b-5p, miR171f-5p, miR319a-5p, miR319c-5p, miR408b-5p, miR528a-3p, and miR528b-3p). [score:3]
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11
[+] score: 10
Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319. [score:3]
The function of miR319 seems to be conserved also in maize where, in addition, this specific miRNA together with miR171 target genes that participate in secondary pathways of auxin and GA signaling transduction, thus affecting embryo differentiation (Zhang et al., 2009a; Kang et al., 2012; Shen et al., 2013). [score:3]
miR319 has a central role in coordinating multiple miRNAs and is strictly connected to phytohormone regulation (Luo et al., 2011). [score:2]
Others miRNAs affecting seed size belong to two families, miR159 and miR319 (Palatnik et al., 2007; Li et al., 2011). [score:1]
Most miR167 and miR319 families were found enriched in seeds rather than leaves (Kang et al., 2012). [score:1]
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12
[+] score: 9
Specificity of plant microRNA target MIMICs: Cross -targeting of miR159 and miR319. [score:5]
According to the previous studies, miR159 and miR319 probably from a homology family potentially regulate heterochronic development [47]. [score:3]
Moreover, Gong et al. also reported that miR159 and miR319 might influence sweet corn seed vigor [48]. [score:1]
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13
[+] score: 6
Other miRNAs from this paper: zma-MIR156d, zma-MIR156f, zma-MIR156g, zma-MIR156b, zma-MIR156c, zma-MIR156e, zma-MIR156a, zma-MIR156h, zma-MIR156i, zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR167a, zma-MIR167b, zma-MIR167d, zma-MIR167c, zma-MIR160e, zma-MIR166a, zma-MIR166h, zma-MIR166e, zma-MIR166i, zma-MIR166f, zma-MIR166g, zma-MIR166b, zma-MIR166c, zma-MIR166d, zma-MIR171a, zma-MIR171b, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, zma-MIR171d, zma-MIR171f, zma-MIR394a, zma-MIR394b, zma-MIR396b, zma-MIR396a, zma-MIR399a, zma-MIR399c, zma-MIR399b, zma-MIR399d, zma-MIR399e, zma-MIR399f, zma-MIR156j, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR319a, zma-MIR319b, zma-MIR319d, zma-MIR166k, zma-MIR166j, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR168a, zma-MIR168b, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR171c, zma-MIR171j, zma-MIR171e, zma-MIR171i, zma-MIR171g, zma-MIR172e, zma-MIR166l, zma-MIR166m, zma-MIR171k, zma-MIR171h, zma-MIR393a, zma-MIR408a, zma-MIR156k, zma-MIR160f, zma-MIR396c, zma-MIR396d, zma-MIR2118a, zma-MIR2118b, zma-MIR2118c, zma-MIR2118d, zma-MIR2118e, zma-MIR2118f, zma-MIR2118g, zma-MIR156l, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR166n, zma-MIR167j, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR171l, zma-MIR171m, zma-MIR171n, zma-MIR390a, zma-MIR393b, zma-MIR393c, zma-MIR396e, zma-MIR396f, zma-MIR396g, zma-MIR396h, zma-MIR397a, zma-MIR397b, zma-MIR398a, zma-MIR398b, zma-MIR399g, zma-MIR399h, zma-MIR399i, zma-MIR399j, zma-MIR408b, zma-MIR528a, zma-MIR528b, zma-MIR827, zma-MIR390b, zma-MIR444a, zma-MIR444b
MiR159, miR160, miR164, miR319, miR390 and miR444 were expressed mainly in the embryo at 9 DAP and 15 DAP, showing their regulatory function in early embryo development (Figure 3c). [score:5]
Among them, miR166 was the most abundant family (17,602) followed by miR171 (11,988), miR827 (7686), miR167, miR396, miR528, miR156, miR408, miR160, miR390, miR159, miR444, miR319, miR398, miR168, miR394, miR164, miR393 and miR169 (Figure 3a). [score:1]
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[+] score: 3
Other miRNAs from this paper: zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR160e, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, sbi-MIR172b, sbi-MIR172c, sbi-MIR172a, sbi-MIR160d, sbi-MIR160a, sbi-MIR160c, sbi-MIR160b, sbi-MIR160e, sbi-MIR164a, sbi-MIR169b, sbi-MIR169a, sbi-MIR395b, sbi-MIR395a, sbi-MIR395d, sbi-MIR395e, sbi-MIR164b, sbi-MIR169c, sbi-MIR169d, sbi-MIR169f, sbi-MIR169g, sbi-MIR169i, sbi-MIR172e, sbi-MIR319a, zma-MIR395b, zma-MIR395c, zma-MIR395a, zma-MIR319a, zma-MIR319b, zma-MIR319d, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR172e, zma-MIR160f, sbi-MIR164c, sbi-MIR395f, sbi-MIR160f, sbi-MIR164d, sbi-MIR164e, sbi-MIR169e, sbi-MIR169h, sbi-MIR169j, sbi-MIR169k, sbi-MIR169l, sbi-MIR169m, sbi-MIR169n, sbi-MIR172d, sbi-MIR319b, sbi-MIR395c, sbi-MIR395g, sbi-MIR395h, sbi-MIR395i, sbi-MIR395j, sbi-MIR395k, sbi-MIR395l, sbi-MIR437g, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR395d, zma-MIR395e, zma-MIR395f, zma-MIR395g, zma-MIR395h, zma-MIR395i, zma-MIR395j, zma-MIR395k, zma-MIR395l, zma-MIR395m, zma-MIR395n, zma-MIR395o, zma-MIR395p, sbi-MIR169o, sbi-MIR169p, sbi-MIR169q, sbi-MIR172f, sbi-MIR5381, sbi-MIR5382, sbi-MIR5383, sbi-MIR5384, sbi-MIR5385, sbi-MIR5386, sbi-MIR5387a, sbi-MIR5388, sbi-MIR5389, sbi-MIR5387b
Although the expression difference of miR160, miR164 and miR319 between BTx623 and Rio was inherited in the F2, and thus of interest for further analysis, it was less than two fold; so we decided to focus on miR169, miR172 and miR395 instead. [score:3]
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[+] score: 3
Other miRNAs from this paper: zma-MIR319a, zma-MIR319b, zma-MIR319d
miR319-controlled TCP4 positively regulates leaf senescence by directly activating the JA biosynthetic gene LIPOXYGENASE 2 (LOX2) [70]. [score:3]
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16
[+] score: 3
Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319. [score:3]
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[+] score: 2
They identified miR528, miR156, miR166, miR168, miR390, miR164, miR167, miR398, miR397, miR408, and miR319 as the most abundant during dedifferentiation. [score:1]
Previous studies in maize long-term subcultured EC indicated that miR156, miR159, miR164, miR168, and miR319 importantly reduce their levels in subcultures maintained for more than 18 months (Dinkova and Alejandri-Ramirez, 2014). [score:1]
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[+] score: 2
However, our results indicate that, excepting miR159, miR319 may be also implicated in regulating 2 maize GAMYB-like genes (ZmMYB049 and ZmMYB119) in this subgroup. [score:2]
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[+] score: 2
The gene encoding zma-MIR319m (P44) and zma-MIR319c (P59) positioned within the marker interval bnlg1265–mmc0371 on chromosome 4, and P44 were located in the peaks of the QTL rdw4-1. The miRNA -mediated gene regulated sub-network also showed that miR319 may be an active participant in signal transduction at the early stage of hypoxic conditions [25]. [score:2]
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[+] score: 1
The most abundant family was miR159, followed by miR319, miR168 and miR156 (Table 2). [score:1]
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