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7 publications mentioning bmo-mir-263b

Open access articles that are associated with the species Bombyx mori and mention the gene name mir-263b. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 21
miR-306 is fairly uniformly expressed across the developmental stages, as judged by the number of reads, whereas miR-263 is dynamically regulated from the larva to adult stages. [score:5]
Additionally, we detected two antisense miRNA loci (miR-263-S and miR-263-AS; miR-306-S and miR-306-AS) that are expressed in sense and antisense directions. [score:4]
Interestingly, miR-263 and miR-306 are preferentially and abundantly expressed in pupae and adults, respectively. [score:3]
Comparing the mature sequences in each sense and antisense pair showed the seed region in miR-263 and miR263-AS to be almost identical, whereas miR-306 and miR-306-AS showed variations in several internal positions, including the seed region (Figure 6e). [score:1]
Predicted fold-back of miR-306 (a) and miR-263 (b) from sense (top panel) and antisense strand (bottom panel) and mature miRNA is shown in red. [score:1]
Mature sequences of miR-306:miR-306-AS pair (e) and miR-263:miR263-AS (f) aligned for showing identical nucleotide sequences. [score:1]
We recovered eight sequence reads that uniquely mapped to the antisense hairpin sequence of miR-306 (miR-306-AS) and a single read mapping to the antisense hairpin of miR-263 (miR-263-AS) (Figure 6c and 6d), which indicates that the antisense transcripts were processed into mature miRNAs in vivo. [score:1]
Our sequencing efforts identified, for the first time, the prevalence of at least two new miRNA loci, miR-306 and miR-263, that generate miRNAs by convergent transcription from both strands in the silkworm genome. [score:1]
miR-306 and miR-263 loci could generate antisense miRNAs in silkworm. [score:1]
Identification of three antisense miRNAs for miR-306, miR-263, and miR-iab-4-AS in silkworm suggests that such antisense miRNAs may be more widespread in other organisms. [score:1]
Sequencing reads uniquely aligned to hairpin sequence of reverse complement of miR-306 (c) and miR-263 (d) followed by their cloning frequency and length (nt). [score:1]
Analysis of the antisense sequences of miR-306-AS and miR-263-AS loci by mFold showed that they can adopt canonical hairpin secondary structures (Figure 6a and 6b). [score:1]
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2
[+] score: 14
In contrast, confirmed high miR-263b expression levels in the head, midgut and fat body of males, and high miR-133 expression levels in the midgut of females (Figure 1A). [score:5]
Similarly, miR-263b was only expressed in the head of the two sexes but its antisense strand was detected in the body wall of males. [score:3]
miR-263b and miR-133 expression patterns were not significantly different between sexes in microarray analyses. [score:3]
In total, 63 miRNAs displayed significant alterations in abundance in at least 1 tissue during the developmental transition from larvae to pupae (e. g., bmo-miR-263b and bmo-miR-124). [score:2]
1) and miR-263b (No. [score:1]
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3
[+] score: 5
Moreover, revealed the presence of miR-263b throughout the metamorphosis process, although high expression was only evident in day 6 and day 7 pupae in microarray experiments. [score:3]
However, a higher number of miRNAs were initially present in day 9 embryos (9 d Em) at the body pigmentation stage, including miR-281-5p, miR-281-3p, miR-263, miR-970, miR-133, miR-283, and miR-317. [score:1]
anti-miR-276-5p, anti-miR-124 and anti-miR-263b displayed signals higher than the threshold of 1,000 at the late 3 [rd ]molt and 4 [th ]molt stages. [score:1]
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4
[+] score: 3
Members of MIR-263, MIR-281 and MIR-9 were also highly expressed in the 4 samples. [score:3]
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5
[+] score: 2
Seven families of conserved miRNAs, including four clusters described above (2, 4, 7, and 8), have paralogs in the silkworm genome (mir-2, mir-993, mir-9, mir-92, mir-263, mir-279, and mir-989) (Figure 4). [score:1]
The read counts of bmo-miR-263a were at least 1000-fold higher than those of bmo-miR-263b in each library. [score:1]
[1 to 20 of 2 sentences]
6
[+] score: 1
These newly identified miRNAs are bmo-miR-2a*, bmo-miR-8*, bmo-miR-13a*, bmo-miR-46*, bmo-miR-263*, bmo-miR-279*, and bmo-miR-305*. [score:1]
[1 to 20 of 1 sentences]
7
[+] score: 1
For instance, bmo-bantam, bmo-miR-12, bmo-miR-263a, bmo-miR-263b, bmo-miR-278, and bmo-miR-8 are both literature -based and database collections but the miRBase-collected miRNAs showed stronger signals. [score:1]
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