miRNA Search Results

sort by 6 publications mentioning cel-mir-794 Open access articles that are associated with the species Caenorhabditis elegans and mention the gene name mir-794. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.
1	[+] score: 14 Other miRNAs from this paper: cel-mir-41, cel-mir-53, cel-mir-62, cel-mir-75, cel-mir-86, cel-mir-229, cel-mir-240, cel-mir-251, cel-mir-252, cel-mir-254, cel-mir-360, cel-mir-787, cel-mir-795, cel-mir-1820, cel-mir-1821, cel-mir-1824, cel-mir-4812, cel-mir-4923b The up-regulated miRNAs included mir-240, mir-75, mir-787, mir-62, mir-251, mir-252, mir-1821, mir-360, mir-353, mir-254, mir-229, mir-1824, mir-795, mir-1820, mir-41, and mir-4923b, while the down-regulated miRNAs included mir-4812, mir-53, mir-794, and mir-86 in C. albicans SC5314 infected nematodes (Fig. 2a,b). [score:7] Based on fold-change analysis and statistical analysis, we identified 16 up-regulated miRNAs (mir-240, mir-75, mir-787, mir-62, mir-251, mir-252, mir-1821, mir-360, mir-353, mir-254, mir-229, mir-1824, mir-795, mir-1820, mir-41, and mir-4923b) and 4 down-regulated miRNAs (mir-4812, mir-53, mir-794, and mir-86) in nematodes infected with C. albicans SC5314 (Figs 1, 2a,b and 9, Table S2). [score:7] [1 to 20 of 2 sentences]
2	[+] score: 8 Other miRNAs from this paper: cel-mir-2, cel-mir-46, cel-mir-47, cel-mir-52, cel-mir-55, cel-mir-57, cel-mir-58a, cel-mir-64, cel-mir-86, cel-mir-230, cel-mir-241, cel-mir-254, cel-mir-357, cel-mir-58b, cel-mir-58c Heat- stress: For the high temperature -treated samples, we selected mir-64-5p as highly expressed (163324,299 reads), mir-86-5p as intermediately expressed (6457,365 reads) and mir-794-5p as lowly expressed (636,433 reads) to validate by qPCR (Figure 4). [score:7] mir-64-5p, mir-86-5p and mir-794-5p are stable upon heat shock, IV. [score:1] [1 to 20 of 2 sentences]
3	[+] score: 3 Other miRNAs from this paper: cel-mir-71, cel-mir-80, cel-mir-86, cel-mir-229, cel-mir-239a, cel-mir-239b Two algorithms namely GeNorm and NormFinder were used to assess stability of reference genes after which two most stable reference genes (mir-86-5p, mir-794-5p) were chosen for further normalization of target genes. [score:3] [1 to 20 of 1 sentences]
4	[+] score: 3 Other miRNAs from this paper: cel-let-7, cel-mir-1, cel-mir-34, cel-mir-35, cel-mir-36, cel-mir-39, cel-mir-41, cel-mir-42, cel-mir-43, cel-mir-44, cel-mir-48, cel-mir-58a, cel-mir-59, cel-mir-66, cel-mir-70, cel-mir-71, cel-mir-79, cel-mir-80, cel-mir-81, cel-mir-82, cel-mir-84, cel-mir-85, cel-mir-228, cel-mir-240, cel-mir-241, cel-mir-246, cel-mir-793, cel-mir-795, cel-mir-58b, cel-mir-4813, cel-mir-58c The third most expressed miRNA was miR-84-5p, that together with other abundant miRNAs like miR-48-5p and let-7-5p, are members of the let-7 family, that also includes miR-7, miR-241, miR-793, miR-794 and miR-795 [65]. [score:3] [1 to 20 of 1 sentences]
5	[+] score: 2 Other miRNAs from this paper: cel-let-7, cel-lin-4, cel-mir-48, cel-mir-71, cel-mir-82, cel-mir-84, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, cel-mir-241, hsa-let-7g, hsa-let-7i, cel-mir-789-1, cel-mir-789-2, cel-mir-793, cel-mir-795 Similarly, using PITA the C. elegans ortholog of Bm1_05425 (T22C1.1) has a site for the let-7 family member miR-794 (results not shown). [score:1] This family includes a further six miRNAs; miR-48, miR-84, miR-241, miR-793, miR-794, and miR-795 [12]. [score:1] [1 to 20 of 2 sentences]
6	[+] score: 1 Other miRNAs from this paper: cel-let-7, cel-lin-4, cel-mir-1, cel-mir-48, cel-mir-84, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, cel-mir-237, cel-mir-241, cel-mir-265, hsa-let-7g, hsa-let-7i, hsa-mir-1-2, hsa-mir-1-1, cel-mir-793, cel-mir-795, cel-mir-1821 Seven C. elegans microRNAs—let-7, miR-48, miR-84, miR-241, miR-793, miR-794, and miR-795—belong to the let-7 family based on 5′-end sequence identity of the mature microRNAs [41]– [43]. [score:1] [1 to 20 of 1 sentences]

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6 publications mentioning cel-mir-794

Open access articles that are associated with the species Caenorhabditis elegans and mention the gene name mir-794. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

[+] score: 14

Other miRNAs from this paper: cel-mir-41, cel-mir-53, cel-mir-62, cel-mir-75, cel-mir-86, cel-mir-229, cel-mir-240, cel-mir-251, cel-mir-252, cel-mir-254, cel-mir-360, cel-mir-787, cel-mir-795, cel-mir-1820, cel-mir-1821, cel-mir-1824, cel-mir-4812, cel-mir-4923b

The up-regulated miRNAs included mir-240, mir-75, mir-787, mir-62, mir-251, mir-252, mir-1821, mir-360, mir-353, mir-254, mir-229, mir-1824, mir-795, mir-1820, mir-41, and mir-4923b, while the down-regulated miRNAs included mir-4812, mir-53, mir-794, and mir-86 in C. albicans SC5314 infected nematodes (Fig. 2a,b). [score:7]

Based on fold-change analysis and statistical analysis, we identified 16 up-regulated miRNAs (mir-240, mir-75, mir-787, mir-62, mir-251, mir-252, mir-1821, mir-360, mir-353, mir-254, mir-229, mir-1824, mir-795, mir-1820, mir-41, and mir-4923b) and 4 down-regulated miRNAs (mir-4812, mir-53, mir-794, and mir-86) in nematodes infected with C. albicans SC5314 (Figs 1, 2a,b and 9, Table S2). [score:7]

[1 to 20 of 2 sentences]

[+] score: 8

Other miRNAs from this paper: cel-mir-2, cel-mir-46, cel-mir-47, cel-mir-52, cel-mir-55, cel-mir-57, cel-mir-58a, cel-mir-64, cel-mir-86, cel-mir-230, cel-mir-241, cel-mir-254, cel-mir-357, cel-mir-58b, cel-mir-58c

Heat- stress: For the high temperature -treated samples, we selected mir-64-5p as highly expressed (163324,299 reads), mir-86-5p as intermediately expressed (6457,365 reads) and mir-794-5p as lowly expressed (636,433 reads) to validate by qPCR (Figure 4). [score:7]

mir-64-5p, mir-86-5p and mir-794-5p are stable upon heat shock, IV. [score:1]

[1 to 20 of 2 sentences]

[+] score: 3

Other miRNAs from this paper: cel-mir-71, cel-mir-80, cel-mir-86, cel-mir-229, cel-mir-239a, cel-mir-239b

Two algorithms namely GeNorm and NormFinder were used to assess stability of reference genes after which two most stable reference genes (mir-86-5p, mir-794-5p) were chosen for further normalization of target genes. [score:3]

[1 to 20 of 1 sentences]

[+] score: 3

Other miRNAs from this paper: cel-let-7, cel-mir-1, cel-mir-34, cel-mir-35, cel-mir-36, cel-mir-39, cel-mir-41, cel-mir-42, cel-mir-43, cel-mir-44, cel-mir-48, cel-mir-58a, cel-mir-59, cel-mir-66, cel-mir-70, cel-mir-71, cel-mir-79, cel-mir-80, cel-mir-81, cel-mir-82, cel-mir-84, cel-mir-85, cel-mir-228, cel-mir-240, cel-mir-241, cel-mir-246, cel-mir-793, cel-mir-795, cel-mir-58b, cel-mir-4813, cel-mir-58c

The third most expressed miRNA was miR-84-5p, that together with other abundant miRNAs like miR-48-5p and let-7-5p, are members of the let-7 family, that also includes miR-7, miR-241, miR-793, miR-794 and miR-795 [65]. [score:3]

[1 to 20 of 1 sentences]

[+] score: 2

Other miRNAs from this paper: cel-let-7, cel-lin-4, cel-mir-48, cel-mir-71, cel-mir-82, cel-mir-84, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, cel-mir-241, hsa-let-7g, hsa-let-7i, cel-mir-789-1, cel-mir-789-2, cel-mir-793, cel-mir-795

Similarly, using PITA the C. elegans ortholog of Bm1_05425 (T22C1.1) has a site for the let-7 family member miR-794 (results not shown). [score:1]

This family includes a further six miRNAs; miR-48, miR-84, miR-241, miR-793, miR-794, and miR-795 [12]. [score:1]

[1 to 20 of 2 sentences]

[+] score: 1

Other miRNAs from this paper: cel-let-7, cel-lin-4, cel-mir-1, cel-mir-48, cel-mir-84, hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7b, hsa-let-7c, hsa-let-7d, hsa-let-7e, hsa-let-7f-1, hsa-let-7f-2, cel-mir-237, cel-mir-241, cel-mir-265, hsa-let-7g, hsa-let-7i, hsa-mir-1-2, hsa-mir-1-1, cel-mir-793, cel-mir-795, cel-mir-1821

Seven C. elegans microRNAs—let-7, miR-48, miR-84, miR-241, miR-793, miR-794, and miR-795—belong to the let-7 family based on 5′-end sequence identity of the mature microRNAs [41]– [43]. [score:1]

[1 to 20 of 1 sentences]

miRBase

6 publications mentioning cel-mir-794