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5 publications mentioning bmo-mir-9b

Open access articles that are associated with the species Bombyx mori and mention the gene name mir-9b. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

[+] score: 10
Another sense/antisense miRNA pair, miR-79/miR-9b, also contains potential targeting sites for the untranslated regions of their home gene, BGIBMGA005856-TA, similar to the checkpoint kinase of Mus musculus. [score:5]
For example, bmo-mir-927, -mir-79, and bmo-mir-2799-as are the reverse complements of the bmo-mir-1926, -mir-9b, and bmo-mir-2799 hairpins, respectively, and form hairpins reminiscent of miRNA precursors (Figure 5A). [score:1]
The total reads of 9 miRstar sequences (miR-10*, miR-276*, miR-281*, miR-282*, miR-2a-1*, miR-965*, miR-993a*, miR-993b*, and miR-9b*) were heavily skewed toward the RNA hairpin arm containing annotated miRNAs in at least one library (Additional file 9, names in green). [score:1]
Seven families of conserved miRNAs, including four clusters described above (2, 4, 7, and 8), have paralogs in the silkworm genome (mir-2, mir-993, mir-9, mir-92, mir-263, mir-279, and mir-989) (Figure 4). [score:1]
For example, bmo-miR-133, miR-137, and miR-932 were identified in the whole body, but not in the anterior-middle and posterior silk gland, opposite to the patterns shown by bmomiR-285, miR-929, and miR-9b. [score:1]
Three miRNAs, bmo-mir-9b, bmo-mir-1924 and bmo-mir-1926, had no sequencing reads corresponding to previously reported miRNA sequences across the three libraries but the star sequence of bmo-mir-9b, miR-9b*, was identified in the anterior-middle and posterior silk glands (highlighted in blue). [score:1]
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[+] score: 8
miR-9 family had the highest expression in moths and the lowest in larvae. [score:3]
Third, we recovered abundant miR-9 and miR-9b reads from all four libraries, and both exhibited a dynamic regulation (Figure 4). [score:2]
First, miR-9 family represented by three members, miR-9, miR-9b and miR-9c in silkworm and these members differ by one nucleotide. [score:1]
Overall, miR-9b level was lower than that of miR-9 in any given stage. [score:1]
It includes miR-1, the entire family of miR-2, the miR-9 family (miR-9 and miR-9b), the let-7 family (let-7a, let-7j), miR-10b, miR-31, miR-71, miR-79, miR-87, miR-98, miR-100, miR-252, miR-263a, miR-275, miR-279, miR-317 and miR-1274b (Table 3 and Figure 4a). [score:1]
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[+] score: 4
bmo-let-7b, bmo-let-7c, bmo-miR-9, bmo-miR-9*, bmo-miR-100-like, bmo-miR-263a, bmo-miR-31 and bmo-bantam were expressed in larva and pupa, but were not detected in moth; of these miRNAs, bmo-miR-9 and bmo-miR-9* are also complementary miRNAs. [score:3]
miRNAs having the most orthologs are mir-133 and mir-9, which are found in 25 and 23 animal species, including D. melanogaster and C. elegans. [score:1]
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[+] score: 3
Members of MIR-263, MIR-281 and MIR-9 were also highly expressed in the 4 samples. [score:3]
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[+] score: 1
We also discovered six pairs that are organized as clusters; bmo-miR-1/bmo-miR-133, bmo-let-7/bmo-miR-100, bmo-miR-12/bmo-miR-283, and bmo-miR-275/bmo-miR-305 are separated by less than 20 kb apart and in the same orientation; bmo-miR-9b overlaps with bmo-miR-79 on the opposite strand; and bmo-miR-2 is adjacent to bmo-miR-13 but on the reverse strand in a tail-to-tail orientation about some twenty basepairs away. [score:1]
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