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3 publications mentioning ccr-mir-181a

Open access articles that are associated with the species Cyprinus carpio and mention the gene name mir-181a. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 41
MiR-132a and miR-181, which targeted dmrt2, were up-regulated, while miR-148 and miR-193a, which were predicted to target smad3, were also up-regulated, and miR-138 targeting amh was down-regulated. [score:16]
Gsdf was the predicted target of miR-132a, miR-146a, miR-210, miR-214, miR-22, and miR-22b; Hsd11b was predicted to target miR-1020-3p and miR-1187-3p; Hsd3b was the predicted target of miR-133-3p and miR-191-5p; Stat1 was predicted to be the target of miR-101a and miR-181a; Sf1 of miR-101b and miR-144; Sox9 of miR-15b and miR-16a; and atm was predicted to be the target of miR-132a and miR-181. [score:11]
The most abundant miRNAs in the present study were miR-430, miR-21, miR-22a, miR-181a, let-7a, miR-199-5p, miR-9-3p, miR-125b, miR-26a, miR-101a, miR-143, and miR-200a, which were not only co-expressed, but also significantly differentially expressed among the five different development stages in Yellow River carp. [score:6]
The miR-181a family is abundantly expressed in the gonads of tilapia [18], mice [66], and humans [67]. [score:3]
Overall, these results suggest that miR-430, miR-21, let-7, miR-181a, and miR-143 may play important roles in ovary differentiation and development in Yellow River carp. [score:2]
Fig. 9 Nucleotide bias at each position in novel miRNAs of Yellow River carp We verified the results of Solexa sequencing by quantitative real-time polymerase chain reaction (qRT-PCR) analysis of 10 randomly selected miRNAs, including five conserved miRNAs (ccr-miR-726, ccr-miR-181a, ccr-miR-200b, ccr-miR-196a, ccr-miR-430) and five novel miRNAs (novel-m4414-5p, novel-m0352-3p, novel-m3425-3p, novel-m1635-5p, novel-m0568-5p). [score:1]
The most abundant miRNAs in primordial gonads were miR-430, miR-21, let-7a, miR-199-5p, miR-9-3p, miR-22a, miR-125b, miR-26a, miR-181a, miR-101a, miR-143, and miR-200a with >10,000 reads each. [score:1]
Existing carp miRNAs were registered in miRBase of common carp, including 145, 139, 143, 143, and 145 existing carp miRNAs (i. e., miRNAs included in C. carpio miRBase) from the five libraries, respectively, of which miR-430, miR-21, let-7a, miR-199-5p, miR-9-3p, miR-22a, miR-125b, miR-26a, miR-181a, miR-101a, miR-143, and miR-200a were the most abundant (Additional file 3). [score:1]
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2
[+] score: 7
Of these, miR-1, miR-133a-3p, and miR-206, were found to be specifically expressed in heart, skeletal muscle, gut, eye, and skin (Fig. 4B), whereas miR-21, miR-26a, miR-181a-5p, and miR-222 were detected in all the samples with little expression level change. [score:5]
We then selected miR-1, miR-21, miR-23a, miR-24, miR-26a, miR-27a, miR-133a-3p, miR-181a-5p, miR-206, miR-214, and miR-222, which have been reported to play roles in the development of vertebrate skeletal muscle (Table 3). [score:2]
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3
[+] score: 5
Three miRNA families, miR-27, miR-30 and miR-181, were analyzed to determine gain and loss of miRNA family members and changes in their sequences (miRNA sequences were downloaded from miRBase). [score:1]
The situation of gain and loss of family members was observed for miR-181 family as well, suggesting that similar events could be found in other miRNA families. [score:1]
Alignments were carried out within miR-27, miR-30 and miR-181 family of zebrafish and human, respectively (Figure 7). [score:1]
miR-27, miR-30 and miR-181 family members in different lineages. [score:1]
Sequence comparison of miR-27, miR-30 and miR-181 family members in zebrafish and human. [score:1]
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