Stem-loop ccr-mir-181a

Accession

MI0023343

Description

Cyprinus carpio ccr-mir-181a precursor miRNA

Literature search

3 open access papers mention ccr-mir-181a
(15 sentences)

Sequence

6219121 reads, 27793.0 reads per million, 33 experiments

cgagucacagugAACAUUCAACGCUGUCGGUGAguuugcaacugagagaaACCAUCGAGUGUUGAGUGUACCcugccccucg
((((...(((.(.(((((((((((..((((((.((((...........))))))))))))))))))))).).)))...))))

Structure

    uca   u A           UG      A    gcaa 
cgag   cag g ACAUUCAACGC  UCGGUG guuu    c
||||   ||| | |||||||||||  |||||| ||||    u
gcuc   guc C UGUGAGUUGUG  AGCUAC CAaa    g
    ccc   C A           --      -    gaga 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-181a-5p

• Accession: MIMAT0026238
• Description: Cyprinus carpio ccr-miR-181a-5p mature miRNA
• Sequence: 13 - AACAUUCAACGCUGUCGGUGA - 33
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-181a-3p

• Accession: MIMAT0058286
• Description: Cyprinus carpio ccr-miR-181a-3p mature miRNA
• Sequence: 51 - ACCAUCGAGUGUUGAGUGUACC - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925