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2 publications mentioning tae-MIR2275

Open access articles that are associated with the species Triticum aestivum and mention the gene name MIR2275. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 78
Therefore, tae-miR2275-3p that targets CAF1 and tae-miR1127a that targets SMARCA3L3, might be relative to the regulation of chromatin integrity in wheat. [score:6]
Sequencing data indicated the expression levels of tae-miR2275-3p, miR396-5p and tae-miR5200 were significant difference between NN1 and SL1 plants, and downregulated in SL1 plants. [score:6]
c The relative expression of selected targets from degradome data for several key miRNAs, CAF1 of tae-miR2275-3p, SMARCA3L3 of tae-miR1127a, XBP2 and EME1 of tae-miR1122c-3p, CYCA3;2 of tae-miR1122b-3p, MTHFR of tae-miR1122a, RPL23 of tae-miR9675-3p and DME of tae-miR9679–5p. [score:5]
In addition, only the expression levels of SMARCA3L3 and CAF1 were negatively correlated with expression levels of tae-miR1127a and tae-miR2275-3p between SL-B and NN-B plants, respectively (Fig.   8). [score:5]
The miRNA-target interactions of tae-miR1122a-MTHFR, tae-miR1122b-CYCA3;2, tae-miR1122c-XPB2, tae-miR1122c-EME1, tae-miR1127a-SMARCA3L3, tae-miR2275-CAF1 and tae-miR9679-DME are required for regulating male sterility in 337S at SL condition. [score:4]
Error bars indicated s. d. based on three biological replicates (** P < 0.01, Student’s t-test)To further determine which miRNA-target interaction of tae-miR2275-CAF1, tae-miR1127a-SMARCA3L3, tae-miR1122c-XPB2, tae-miR1122c-EME1, tae-miR1122b-CYCA3;2, tae-miR9679-DME or tae-miR1122a-MTHFR is the vital and dominant determiner for regulating male sterility in 337S. [score:4]
The miRNA-target interactions of tae-miR2275-CAF1 and tae-miR1127a-SMARCA3L3 might be required for regulating the progress of meiosis in male reproductive cells. [score:4]
The miRNA-target interactions of tae-miR2275-CAF1 and tae-miR1127a-SMARCA3L3 might be involved in regulating male fertility in 337S. [score:4]
Error bars indicated s. d. based on three biological replicates (** P < 0.01, Student’s t-test) To further determine which miRNA-target interaction of tae-miR2275-CAF1, tae-miR1127a-SMARCA3L3, tae-miR1122c-XPB2, tae-miR1122c-EME1, tae-miR1122b-CYCA3;2, tae-miR9679-DME or tae-miR1122a-MTHFR is the vital and dominant determiner for regulating male sterility in 337S. [score:4]
Therefore, the interactions of tae-miR1127a-SMARCA3L3 and tae-miR2275-CAF1 might be involved in regulating the male reproductive development in the 337S. [score:3]
As shown in Fig. 5, the expression level of tae-miR2275-3p in SL plants was much lower than that in NN plants at MMC stage and MP stage. [score:3]
a and b The T-plots of SMARCA3L3 and CAF1 targeted by tae-miR2275-3p and tae-miR1127a. [score:3]
tae-miR2275-3p and miRNA families of MiR1120 and MiR1122 were found to be involved in the regulation of meiosis process and early anther development in wheat. [score:3]
Overall, tae-miR2275-3p might be also involved in biogenesis of 24-nt phasiRNAs that might be associated with the MEL1 gene targeted by tae-miR9652-5p at premeiotic or meiotic stages in wheat. [score:3]
However, only tae-miR2275-3p expressed significant difference between SL and NN plants as both miRNA-seq and qRT-PCR data indicated (Fig. 5). [score:3]
Our degradome data revealed eight genes targeted by tae-miR2275-3p, three are CAF1 homologs in the category 0 (Fig. 7b). [score:3]
The target CCR4 -associated factor 1 (CAF1) of miR2275, a subunit of the Carbon Catabolite Repressed 4-Negative on TATA-less (CCR4-NOT) complex, contributes to the process of early meiosis, and was first identified here. [score:3]
Therefore, the 6 candidate miRNAs tae-miR1122a, tae-miR1122b-3p, tae-miR1122c-3p, tae-miR1127a, tae-miR9675-3p, tae-miR9679–5p together with tae-miR2275-3p were selected to further dissect their functions in wheat reproductive development. [score:2]
tae-miR2275-3p and tae-miR5200 were also extremely suppressed in SL2 compared to NN2 plants (Fig. 5). [score:2]
Moreover, miR2275 cleaving the precursor RNA to trigger the biogenesis of phasiRNAs in maize anther development at meiosis stage [15], were also found. [score:2]
tae-miR2275 might be involved in generating 24-phasiRNAs in wheat. [score:1]
Thus, more work is needed to test if tae-miR2275-3p may be also involved in generating 24-phasiRNAs in wheat in future. [score:1]
miR2275 and miR2118 were identified as the triggers for generating 21-nt and 24-nt phasiRNAs at meiosis and premeiotic stage, respectively [15]. [score:1]
Therefore, as a conservative microRNA in monocotyledon plants (Additional file  20: Table S13), tae-miR2275-3p may play a dominative role for meiosis in wheat. [score:1]
Wheat Male sterility Meiosis miRNAs Small RNA sequencing Degradome Tae-miR1127a Tae-miR2275 The improvement of wheat (Triticum aestivum L. ) product is an important strategy to guarantee food security and solve the problem on feeding the population in China and many other countries with limited availability of cultivated land. [score:1]
In maize, miR2118 and miR2275 were identified as the triggers for generating 21-nt and 24-nt reproductive phasiRNAs, respectively [15], which are primarily derived from PHAS loci of lncRNAs [16]. [score:1]
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[+] score: 4
Other miRNAs from this paper: osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR160a, osa-MIR160b, osa-MIR160c, osa-MIR160d, osa-MIR164a, osa-MIR164b, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR169a, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR397a, osa-MIR397b, osa-MIR398a, osa-MIR398b, osa-MIR156k, osa-MIR156l, osa-MIR159a, osa-MIR159b, osa-MIR159c, osa-MIR159d, osa-MIR159e, osa-MIR159f, osa-MIR160e, osa-MIR160f, osa-MIR164c, osa-MIR164d, osa-MIR164e, osa-MIR166k, osa-MIR166l, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR168a, osa-MIR168b, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR171b, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR172d, osa-MIR167j, osa-MIR166m, osa-MIR166j, osa-MIR164f, zma-MIR156d, zma-MIR156f, zma-MIR156g, zma-MIR156b, zma-MIR156c, zma-MIR156e, zma-MIR156a, zma-MIR156h, zma-MIR156i, zma-MIR160a, zma-MIR160c, zma-MIR160d, zma-MIR160b, zma-MIR164a, zma-MIR164d, zma-MIR164b, zma-MIR164c, zma-MIR169a, zma-MIR169b, zma-MIR167a, zma-MIR167b, zma-MIR167d, zma-MIR167c, zma-MIR160e, zma-MIR166a, zma-MIR166h, zma-MIR166e, zma-MIR166i, zma-MIR166f, zma-MIR166g, zma-MIR166b, zma-MIR166c, zma-MIR166d, zma-MIR171b, zma-MIR172a, zma-MIR172d, zma-MIR172b, zma-MIR172c, osa-MIR396e, zma-MIR396b, zma-MIR396a, zma-MIR156j, zma-MIR159a, zma-MIR159b, zma-MIR159c, zma-MIR159d, zma-MIR166k, zma-MIR166j, zma-MIR167e, zma-MIR167f, zma-MIR167g, zma-MIR167h, zma-MIR167i, zma-MIR168a, zma-MIR168b, zma-MIR169c, zma-MIR169f, zma-MIR169g, zma-MIR169h, zma-MIR169i, zma-MIR169k, zma-MIR169j, zma-MIR169d, zma-MIR169e, zma-MIR172e, zma-MIR166l, zma-MIR166m, zma-MIR156k, zma-MIR160f, tae-MIR159a, tae-MIR159b, tae-MIR160, tae-MIR164, tae-MIR167a, tae-MIR1127a, osa-MIR169r, osa-MIR396f, zma-MIR396c, zma-MIR396d, osa-MIR2275a, osa-MIR2275b, zma-MIR2275a, zma-MIR2275b, zma-MIR2275c, zma-MIR2275d, osa-MIR396g, osa-MIR396h, osa-MIR396d, zma-MIR156l, zma-MIR159e, zma-MIR159f, zma-MIR159g, zma-MIR159h, zma-MIR159i, zma-MIR159j, zma-MIR159k, zma-MIR160g, zma-MIR164e, zma-MIR164f, zma-MIR164g, zma-MIR164h, zma-MIR166n, zma-MIR167j, zma-MIR169l, zma-MIR169m, zma-MIR169n, zma-MIR169o, zma-MIR169p, zma-MIR169q, zma-MIR169r, zma-MIR396e, zma-MIR396f, zma-MIR396g, zma-MIR396h, zma-MIR397a, zma-MIR397b, zma-MIR398a, zma-MIR398b, hvu-MIR156a, tae-MIR156, hvu-MIR159b, hvu-MIR159a, hvu-MIR166a, tae-MIR167b, hvu-MIR168, hvu-MIR169, tae-MIR169, hvu-MIR397a, tae-MIR398, tae-MIR171b, hvu-MIR166b, hvu-MIR166c, osa-MIR2275c, osa-MIR2275d, tae-MIR1122b, tae-MIR9653a, tae-MIR9654a, tae-MIR9656, tae-MIR9657a, tae-MIR9659, tae-MIR9660, tae-MIR1127b, tae-MIR9661, tae-MIR396, tae-MIR9665, tae-MIR9667, tae-MIR167c, tae-MIR1120b, tae-MIR397, tae-MIR1130b, tae-MIR5384, tae-MIR9675, tae-MIR1120c, tae-MIR9679, tae-MIR9657b, hvu-MIR397b, hvu-MIR156b, tae-MIR9653b
Of the 55 novel miRNAs, 22 showed preferential expression in the different developmental stages of wheat seed (Figure  3b), with the logarithm of the fold change of 1.0 ~ 7.6, and half of these miRNAs (tae-miR1122b, tae-miR9653, tae-miR9654a, tae-miR9656, tae-miR9657a, tae-miR9659, tae-miR2275, tae-miR9665, tae-miR1127b, tae-miR9660, tae-miR9657b and tae-miR9667) were seed specific (Figure  3b, Additional file 5). [score:4]
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