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miRBase
For clusters
Select organism and the desired inter-miRNA distance.
Organism:
Acacia auriculiformis
Acacia mangium
Acanthopleura granulata
Acropora digitifera
Acyrthosiphon pisum
Adineta vaga
Aedes aegypti
Aegilops tauschii
Aiptasia pallida
Alligator mississippiensis
Amborella trichopoda
Amphimedon queenslandica
Anas platyrhynchos
Anolis carolinensis
Anopheles gambiae
Aphis gossypii
Apis mellifera
Aquilegia caerulea
Arabidopsis lyrata
Arabidopsis thaliana
Arachis hypogaea
Artibeus jamaicensis
Ascaris suum
Asparagus officinalis
Astatotilapia burtoni
Ateles geoffroyi
Avicennia marina
Bactrocera dorsalis
Bandicoot papillomatosis carcinomatosis virus type 1
Bandicoot papillomatosis carcinomatosis virus type 2
Biston betularia
BK polyomavirus
Blattella germanica
Bombyx mori
Bos taurus
Bovine foamy virus
Bovine herpesvirus 1
Bovine herpesvirus 5
Bovine leukemia virus
Brachionus koreanus
Brachionus plicatilis
Brachypodium distachyon
Branchiostoma belcheri
Branchiostoma floridae
Branchiostoma lanceolatum
Brassica napus
Brassica oleracea
Brassica rapa
Brugia malayi
Brugia pahangi
Bruguiera cylindrica
Bruguiera gymnorhiza
Bubalus bubalis
Caenorhabditis brenneri
Caenorhabditis briggsae
Caenorhabditis elegans
Caenorhabditis remanei
Callithrix jacchus
Callorhinchus milii
Camelina sativa
Canis lupus familiaris
Capitella teleta
Capra hircus
Carassius auratus
Carica papaya
Cavia porcellus
Centruroides sculpturatus
Cerebratulus lacteus
Chlamydomonas reinhardtii
Chrysemys picta
Ciona intestinalis
Ciona savignyi
Citrus clementina
Citrus reticulata
Citrus sinensis
Citrus trifoliata
Columba livia
Cricetulus griseus
Cucumis melo
Cucumis sativus
Culex quinquefasciatus
Cunninghamia lanceolata
Cynara cardunculus
Cyprinus carpio
Danio rerio
Daphnia magna
Daphnia pulex
Dasypus novemcinctus
Daubentonia madagascariensis
Diachasmimorpha longicaudata
Dictyostelium discoideum
Digitalis purpurea
Dimorphilus gyrociliatus
Dinoponera quadriceps
Drosophila ananassae
Drosophila erecta
Drosophila grimshawi
Drosophila melanogaster
Drosophila mojavensis
Drosophila persimilis
Drosophila pseudoobscura
Drosophila sechellia
Drosophila simulans
Drosophila virilis
Drosophila willistoni
Drosophila yakuba
Duck enteritis virus
Echinococcus granulosus
Echinococcus multilocularis
Echinops telfairi
Ectocarpus siliculosus
Eisenia fetida
Elaeis guineensis
Electrophorus electricus
Ephydatia muelleri
Epimenia babai
Epstein Barr virus
Eptatretus burgeri
Eptesicus fuscus
Equus caballus
Eugenia uniflora
Euprymna scolopes
Fasciola hepatica
Festuca arundinacea
Fragaria vesca
Fugu rubripes
Gadus morhua
Gallus gallus
Gekko japonicus
Glossina pallidipes
Glottidia pyramidata
Glycine max
Glycine soja
Gorilla gorilla
Gorilla gorilla gorilla polyomavirus 1
Gossypium arboreum
Gossypium herbaceum
Gossypium hirsutum
Gossypium raimondii
Gyrodactylus salaris
Haemonchus contortus
Halcurias pilatus
Haliotis rufescens
Helianthus annuus
Helianthus argophyllus
Helianthus ciliaris
Helianthus exilis
Helianthus paradoxus
Helianthus petiolaris
Helianthus tuberosus
Heliconius melpomene
Heligmosomoides polygyrus
Herpes B virus
Herpes Simplex Virus 1
Herpes Simplex Virus 2
Herpesvirus of turkeys
Herpesvirus saimiri strain A11
Hevea brasiliensis
Hippoglossus hippoglossus
Hofstenia miamia
Homo sapiens
Hordeum vulgare
Human cytomegalovirus
Human herpesvirus 6B
Human immunodeficiency virus 1
Hydra magnipapillata
Hydra vulgaris
Ictalurus punctatus
Infectious laryngotracheitis virus
Ixodes scapularis
JC polyomavirus
Kaposi sarcoma-associated herpesvirus
Laevipilina hyalina
Lagothrix lagotricha
Latimeria chalumnae
Lemur catta
Lepisosteus oculatus
Leucosolenia complicata
Limulus polyphemus
Lineus longissimus
Lingula anatina
Linum usitatissimum
Locusta migratoria
Lottia gigantea
Lotus japonicus
Loxodonta africana
Lytechinus variegatus
Macaca mulatta
Macaca nemestrina
Magallana gigas
Malus domestica
Manduca sexta
Manihot esculenta
Marchantia polymorpha
Mareks disease virus type 1
Mareks disease virus type 2
Marsupenaeus japonicus
Mayetiola destructor
Medicago truncatula
Melibe leonina
Merkel cell polyomavirus
Mesocestoides corti
Metriaclima zebra
Microcaecilia unicolor
Microcebus murinus
Monodelphis domestica
Monopterus albus
Mopalia muscosa
Mouse cytomegalovirus
Mouse gammaherpesvirus 68
Mus musculus
Nasonia giraulti
Nasonia longicornis
Nasonia vitripennis
Nautilus pompilius
Nematostella vectensis
Neoechinorhynchus agilis
Neolamprologus brichardi
Nicotiana tabacum
Nomascus leucogenys
Notamacropus eugenii
Nothobranchius furzeri
Octopus bimaculoides
Octopus vulgaris
Oikopleura dioica
Oncorhynchus mykiss
Ophiophagus hannah
Oreochromis niloticus
Ornithorhynchus anatinus
Oryctolagus cuniculus
Oryza sativa
Oryzias latipes
Otolemur garnettii
Ovis aries
Owenia fusiformis
Paeonia lactiflora
Pan paniscus
Pan troglodytes
Pan troglodytes verus polyomavirus 2a
Panagrellus redivivus
Panax ginseng
Papaver somniferum
Papio hamadryas
Paralichthys olivaceus
Parasteatoda tepidariorum
Parhyale hawaiensis
Patiria miniata
Petromyzon marinus
Phaeodactylum tricornutum
Phaseolus vulgaris
Phoronis australis
Physcomitrella patens
Phytophthora infestans
Phytophthora ramorum
Phytophthora sojae
Picea abies
Pictodentalium vernedei
Pinus densata
Pinus taeda
Platynereis dumerilii
Plutella xylostella
Polistes canadensis
Pomphorhynchus laevis
Pongo abelii
Pongo pygmaeus
Populus euphratica
Populus trichocarpa
Pristionchus pacificus
Prostheceraeus crozeri
Prunus mume
Prunus persica
Pseudorabies virus
Pteropus alecto
Ptychodera flava
Pundamilia nyererei
Pygathrix bieti
Python bivittatus
Raccoon polyomavirus
Rattus norvegicus
Rehmannia glutinosa
Rhesus lymphocryptovirus
Rhesus monkey rhadinovirus
Rhipicephalus microplus
Ricinus communis
Ruditapes philippinarum
Saccharum officinarum
Saccharum sp.
Saccoglossus kowalevskii
Saguinus labiatus
Saimiri boliviensis
Salicornia europaea
Salmo salar
Salvia miltiorrhiza
Salvia sclarea
Sarcophilus harrisii
Schistosoma japonicum
Schistosoma mansoni
Schmidtea mediterranea
Scyliorhinus torazame
Seison nebaliae
Selaginella moellendorffii
Setaria italica
Simian foamy virus
Simian virus 40
Sipunculus nudus
Solanum lycopersicum
Solanum tuberosum
Sorghum bicolor
Sphenodon punctatus
Spodoptera frugiperda
Strigamia maritima
Strongylocentrotus purpuratus
Strongyloides ratti
Sus scrofa
Sycon ciliatum
Symbiodinium microadriaticum
Symphalangus syndactylus
Symsagittifera roscoffensis
Taeniopygia guttata
Terebratulina retusa
Tetranychus urticae
Tetraodon nigroviridis
Theobroma cacao
Torque teno virus
Tribolium castaneum
Triops cancriformis
Triticum aestivum
Triticum turgidum
Tupaia chinensis
Vigna unguiculata
Vitis vinifera
Volvox carteri
Vriesea carinata
Wirenia argentea
Xenopus laevis
Xenopus tropicalis
Xenoturbella bocki
Zea mays
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