Stem-loop mmu-mir-146a

Accession

MI0000170

Symbol

MGI: Mir146

Description

Mus musculus mmu-mir-146a precursor miRNA

Literature search

364 open access papers mention mmu-mir-146a
(4575 sentences)

Sequence

175869 reads, 348 reads per million, 104 experiments

agcucUGAGAACUGAAUUCCAUGGGUUauaucaaugucagaCCUGUGAAAUUCAGUUCUUCAGcu
((((..((((((((((((.((((((((............)))))))).)))))))))))).))))

Structure

    cU            C        auauc 
agcu  GAGAACUGAAUU CAUGGGUU     a
||||  |||||||||||| ||||||||      
ucGA  UUCUUGACUUAA GUGUCCag     a
    -C            A        acugu 

Annotation confidence High

Genome context

chr11: 43374397-43374461 [-]

Mature mmu-miR-146a-5p

• Accession: MIMAT0000158
• Description: Mus musculus mmu-miR-146a-5p mature miRNA
• Sequence: 6 - UGAGAACUGAAUUCCAUGGGUU - 27
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

Mature mmu-miR-146a-3p

• Accession: MIMAT0016989
• Description: Mus musculus mmu-miR-146a-3p mature miRNA
• Sequence: 42 - CCUGUGAAAUUCAGUUCUUCAG - 63
• Evidence: experimental ; Illumina [4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12007417
   Identification of tissue-specific microRNAs from mouse
   "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
   "Curr Biol (2002) 12:735-739


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009