Stem-loop mmu-mir-150

Accession

MI0000172

Symbol

MGI: Mir150

Description

Mus musculus mmu-mir-150 precursor miRNA mir-150

Gene
family

RF00767; mir-150

Literature search

162 open access papers mention mmu-mir-150
(1594 sentences)

Sequence

185875 reads, 423 reads per million, 100 experiments

cccugUCUCCCAACCCUUGUACCAGUGcugugccucagaccCUGGUACAGGCCUGGGGGAUAGgg
((((((((((((..(((.(((((((.((((.....))).).))))))))))..))))))))))))

Structure

            AC   U       U -   u 
cccugUCUCCCA  CCU GUACCAG G cug g
||||||||||||  ||| ||||||| | ||| c
ggGAUAGGGGGU  GGA CAUGGUC c gac c
            CC   -       c a   u 

Annotation confidence Medium

Genome context

chr7: 45121757-45121821 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-150

Mature mmu-miR-150-5p

• Accession: MIMAT0000160
• Description: Mus musculus mmu-miR-150-5p mature miRNA
• Sequence: 6 - UCUCCCAACCCUUGUACCAGUG - 27
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

Mature mmu-miR-150-3p

• Accession: MIMAT0004535
• Description: Mus musculus mmu-miR-150-3p mature miRNA
• Sequence: 42 - CUGGUACAGGCCUGGGGGAUAG - 63
• Evidence: experimental ; cloned [2], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12007417
   Identification of tissue-specific microRNAs from mouse
   "Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T"
   "Curr Biol (2002) 12:735-739


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009