Accession
MI0000207
Description
Arabidopsis thaliana
ath-MIR166g precursor miRNA
Literature search
41 open access papers mention ath-MIR166g
(307 sentences)
(307 sentences)
Sequence
64561384
reads,
199942.0
reads per million, 185 experiments
gcgauuuaggguuuagaGGAAUGUUGUUUGGCUCGAGGucauggagaguaauucguuaacccaacucaaaacucuaaaugauucUCGGACCAGGCUUCAUUCCCCUcaaccuauuuuaucgc
(((((...(((((.((.((((((..((((((.((((((((((..(((((.....(((.....))).....)))))..)))).)))))).))))))..)))))).)).))))).....)))))
(((((...(((((.((.((((((..((((((.((((((((((..(((((.....(((.....))).....)))))..)))).)))))).))))))..)))))).)).))))).....)))))
Structure
--uua u a UU C - gg aauuc a
gcgau ggguu ag GGAAUG GUUUGG UCGAGG ucau agagu guu a
||||| ||||| || |||||| |||||| |||||| |||| ||||| ||| c
cgcua uccaa UC CCUUAC CGGACC GGCUcu agua ucuca caa c
uuuua c C UU A u aa aaacu c
Annotation confidence
High
Do you think this miRNA is real?
Comments
MIR166g, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2].
Genome context
chr5: 25504798-25504919 [+]
Database links
Mature ath-miR166g-5p
| Accession | MIMAT0053802 |
| Description | Arabidopsis thaliana ath-miR166g-5p mature miRNA |
| Sequence | 18 - GGAAUGUUGUUUGGCUCGAGG - 38 |
| Evidence |
experimental
unknown |
Mature ath-miR166g-3p
| Accession | MIMAT0000195 |
| Description | Arabidopsis thaliana ath-miR166g-3p mature miRNA |
| Sequence | 85 - UCGGACCAGGCUUCAUUCCCCU - 106 |
| Evidence |
experimental
cloned [1], Northern [1], 454 [3-4], MPSS [3], Illumina [5] |
References
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