Stem-loop mmu-mir-185

Accession

MI0000227

Symbol

MGI: Mir185

Description

Mus musculus mmu-mir-185 precursor miRNA mir-185

Gene
family

RF00771; mir-185

Literature search

36 open access papers mention mmu-mir-185
(225 sentences)

Sequence

540970 reads, 1477 reads per million, 104 experiments

agggauUGGAGAGAAAGGCAGUUCCUGAugguccccucccAGGGGCUGGCUUUCCUCUGGUccuu
.((((((((((.(((((.(((((((((..((......))))))))))).))))))))))))))).

Structure

a          A     G         Au  uc 
 gggauUGGAG GAAAG CAGUUCCUG  gg  c
 |||||||||| ||||| |||||||||  ||   
 uccUGGUCUC CUUUC GUCGGGGAc  cc  c
u          -     G         --  uc 

Annotation confidence High

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context

chr16: 18327401-18327465 [-]

Mature mmu-miR-185-5p

• Accession: MIMAT0000214
• Description: Mus musculus mmu-miR-185-5p mature miRNA
• Sequence: 7 - UGGAGAGAAAGGCAGUUCCUGA - 28
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

Mature mmu-miR-185-3p

• Accession: MIMAT0016996
• Description: Mus musculus mmu-miR-185-3p mature miRNA
• Sequence: 41 - AGGGGCUGGCUUUCCUCUGGU - 61
• Evidence: experimental ; Illumina [4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12554859
   New microRNAs from mouse and human
   "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
   "RNA (2003) 9:175-179


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009