Stem-loop mmu-mir-201

Accession

MI0000244

Symbol

MGI: Mir201

Description

Mus musculus mmu-mir-201 precursor miRNA mir-890

Gene
family

RF04280; mir-890

Literature search

5 open access papers mention mmu-mir-201
(10 sentences)

Sequence

3414 reads, 160 reads per million, 44 experiments

uaccuUACUCAGUAAGGCAUUGUUCUUcuauauuaauaaaUGAACAGUGCCUUUCUGUGUAGGgua
((((((((.(((.((((((((((((...(((....)))...)))))))))))).))).))))))))

Structure

        U   U            UUc   a 
uaccuUAC CAG AAGGCAUUGUUC   uau u
|||||||| ||| ||||||||||||   |||  
augGGAUG GUC UUCCGUGACAAG   aua u
        U   U            Uaa   a 

Annotation confidence High

Genome context

chrX: 67988096-67988161 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-201

Mature mmu-miR-201-5p

• Accession: MIMAT0000234
• Description: Mus musculus mmu-miR-201-5p mature miRNA
• Sequence: 6 - UACUCAGUAAGGCAUUGUUCUU - 27
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

Mature mmu-miR-201-3p

• Accession: MIMAT0017001
• Description: Mus musculus mmu-miR-201-3p mature miRNA
• Sequence: 41 - UGAACAGUGCCUUUCUGUGUAGG - 63
• Evidence: experimental ; Illumina [4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12554859
   New microRNAs from mouse and human
   "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
   "RNA (2003) 9:175-179


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009