Stem-loop mmu-mir-205

Accession

MI0000248

Symbol

MGI: Mir205

Description

Mus musculus mmu-mir-205 precursor miRNA mir-205

Gene
family

RF00656; mir-205

Literature search

105 open access papers mention mmu-mir-205
(861 sentences)

Sequence

51711 reads, 1920 reads per million, 68 experiments

cucuugUCCUUCAUUCCACCGGAGUCUGucuuaugccaaccaGAUUUCAGUGGAGUGAAGCUCAggag
((((((..(((((((((((.((((((((............)))))))).)))))))))))..))))))

Structure

      UC           C        ucuua 
cucuug  CUUCAUUCCAC GGAGUCUG     u
||||||  ||||||||||| ||||||||      
gaggAC  GAAGUGAGGUG CUUUAGac     g
      UC           A        caacc 

Annotation confidence High

Genome context

chr1: 193507463-193507530 [-]

Mature mmu-miR-205-5p

• Accession: MIMAT0000238
• Description: Mus musculus mmu-miR-205-5p mature miRNA
• Sequence: 7 - UCCUUCAUUCCACCGGAGUCUG - 28
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

Mature mmu-miR-205-3p

• Accession: MIMAT0017003
• Description: Mus musculus mmu-miR-205-3p mature miRNA
• Sequence: 43 - GAUUUCAGUGGAGUGAAGCUCA - 64
• Evidence: experimental ; Illumina [4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12554859
   New microRNAs from mouse and human
   "Lagos-Quintana M, Rauhut R, Meyer J, Borkhardt A, Tuschl T"
   "RNA (2003) 9:175-179


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009