miRBase entry: hsa-mir-187

Stem-loop hsa-mir-187


Accession
MI0000274
Symbol
HGNC: MIR187
Description
Homo sapiens hsa-mir-187 precursor miRNA mir-187
Gene
family?
RF00674; mir-187

Literature search
52 open access papers mention hsa-mir-187
(335 sentences)

Sequence

9261 reads, 104 reads per million, 66 experiments
ggucgggcucaccaugacacagugugagaccucgGGCUACAACACAGGACCCGGGCgcugcucugaccccUCGUGUCUUGUGUUGCAGCCGGagggacgcagguccgca
.(.((((((.............((((...((((.((((.(((((((((((.((((.((......).).)).)).))))))))))).)))).))))..))))))))))).

Structure
g u      caccaugacacag    aga    g    A           C  -  C - ug 
 g cgggcu             ugug   ccuc GGCU CAACACAGGAC CG GG g c  c
 | ||||||             ||||   |||| |||| ||||||||||| || || | |   
 c gccugg             acgc   ggaG CCGA GUUGUGUUCUG GC cc c g  u
a -      -------------    -ag    G    C           U  U  c a uc 


Annotation confidence High
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Comments
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR. Landgraf et al. confirm expression in human [2]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context
chr18: 35904818-35904926 [-]

Disease association
hsa-mir-187 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-187-5p

Accession MIMAT0004561
Description Homo sapiens hsa-miR-187-5p mature miRNA
Sequence 35 - GGCUACAACACAGGACCCGGGC - 56
Evidence experimental
cloned [2]
Database links
Predicted targets

Mature hsa-miR-187-3p

Accession MIMAT0000262
Description Homo sapiens hsa-miR-187-3p mature miRNA
Sequence 71 - UCGUGUCUUGUGUUGCAGCCGG - 92
Evidence experimental
cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 12624257
    Vertebrate microRNA genes
    "Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP"
    "Science (2003) 299:1540