Stem-loop cel-mir-270

Accession

MI0000350

Description

Caenorhabditis elegans cel-mir-270 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

gucgcuagccucuuuaccugccuacacaccuuucugccuacguggcacauugguaggcaagagGGCAUGAUGUAGCAGUGGAGauggacugccac
...((.(((((((((((.(((.(((((((((((.(((((((...........))))))).)))))..)).)))))))))))))).)).))))...

Structure

guc  u  -  -       c   c    -  --     c       gugg 
   gc ag cc ucuuuac ugc uaca ca  ccuuu ugccuac    c
   || || || ||||||| ||| |||| ||  ||||| |||||||    a
   cg uc gg aGAGGUG ACG AUGU GU  GGgag acggaug    c
cac  -  a  u       -   -    A  AC     a       guua 

Annotation confidence Not enough data

Comments

This sequence was predicted by computational approaches and validated using a PCR amplification protocol.

Genome context

chrIV: 3258455-3258549 [-]

Mature cel-miR-270

• Accession: MIMAT0000326
• Description: Caenorhabditis elegans cel-miR-270 mature miRNA
• Sequence: 64 - GGCAUGAUGUAGCAGUGGAG - 83
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 12769849
   Computational and experimental identification of C. elegans microRNAs
   "Grad Y, Aach J, Hayes GD, Reinhart BJ, Church GM, Ruvkun G, Kim J"
   "Mol Cell (2003) 11:1253-1263