miRBase entry: cel-mir-271

Stem-loop cel-mir-271


Accession
MI0000351
Description
Caenorhabditis elegans cel-mir-271 precursor miRNA


Sequence

2 reads, 0 reads per million, 2 experiments
aauagaaaacggggcccgccggcUCGCCGGGUGGAAAGCAUUCgacagcaagacguguuuuucaaucugcgacucggcgauucccaucaucacu
..........((((..((((((.((((.((.((((((((((((........)).)))))))))).)).)))).))))))..)))).........

Structure
aauagaaaac    cc      c    C  G          -  gac 
          gggg  cgccgg UCGC GG UGGAAAGCAU UC   a
          ||||  |||||| |||| || |||||||||| ||    
          cccu  gcggcu agcg cu acuuuuugug ag   g
-ucacuacua    ua      c    u  a          c  aac 


Annotation confidence Not enough data
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Comments
This sequence was predicted by computational approaches and validated using a PCR amplification protocol.

Genome context
chrX: 3412004-3412097 [+]

Database links

Mature cel-miR-271

Accession MIMAT0000327
Description Caenorhabditis elegans cel-miR-271 mature miRNA
Sequence 24 - UCGCCGGGUGGAAAGCAUUC - 43
Evidence experimental
PCR [1]

References

  1. PubMed ID: 12769849
    Computational and experimental identification of C. elegans microRNAs
    "Grad Y, Aach J, Hayes GD, Reinhart BJ, Church GM, Ruvkun G, Kim J"
    "Mol Cell (2003) 11:1253-1263