Stem-loop cel-mir-273

Accession

MI0000353

Description

Caenorhabditis elegans cel-mir-273 precursor miRNA

Literature search

3 open access papers mention cel-mir-273
(3 sentences)

Sequence

1 reads, 0 reads per million, 1 experiments

accucguuuugggagcagccggcauuuuacgggcuacacuuuuuuuaaaauugaugugUGCCCGUACUGUGUCGGCUGcuuugaaaauuucggu
(((..(((((.((((((((((((((..(((((((.((((................)))))))))))..)))))))))))))).)))))...)))

Structure

   -uc     g              uu       u    uuuuuuu 
acc   guuuu ggagcagccggcau  uacgggc acac       a
|||   ||||| ||||||||||||||  ||||||| ||||        
ugg   uaaaa uuucGUCGGCUGUG  AUGCCCG Ugug       a
   cuu     g              UC       -    uaguuaa 

Annotation confidence Low

Comments

This sequence was predicted by computational approaches and validated using a PCR amplification protocol.

Genome context

chrII: 14947039-14947132 [+]

Mature cel-miR-273

• Accession: MIMAT0000329
• Description: Caenorhabditis elegans cel-miR-273 mature miRNA
• Sequence: 59 - UGCCCGUACUGUGUCGGCUG - 78
• Evidence: experimental ; PCR [1]

References

1. PubMed ID: 12769849
   Computational and experimental identification of C. elegans microRNAs
   "Grad Y, Aach J, Hayes GD, Reinhart BJ, Church GM, Ruvkun G, Kim J"
   "Mol Cell (2003) 11:1253-1263