Stem-loop mmu-mir-295

Accession

MI0000393

Symbol

MGI: Mir295

Description

Mus musculus mmu-mir-295 precursor miRNA

Gene family

MIPF0000068; mir-290

Literature search

23 open access papers mention mmu-mir-295
(134 sentences)

Sequence

80693 reads, 1759 reads per million, 62 experiments

ggugagACUCAAAUGUGGGGCACACUUCuggacuguacauagAAAGUGCUACUACUUUUGAGUCUcucc
((.((((((((((.(((((((((..(((((.........))))).))))).)))).)))))))))).))

Structure

  u          U    -     AC     gac 
gg gagACUCAAA GUGG GGCAC  UUCug   u
|| |||||||||| |||| |||||  |||||   g
cc cUCUGAGUUU CAUC UCGUG  AAgau   u
  u          U    A     -A     aca 

Annotation confidence High

Genome context

chr7: 3220773-3220841 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from mmu-mir-295

Mature mmu-miR-295-5p

• Accession: MIMAT0004575
• Description: Mus musculus mmu-miR-295-5p mature miRNA
• Sequence: 7 - ACUCAAAUGUGGGGCACACUUC - 28
• Evidence: experimental ; cloned [2], Illumina [3-4]

Mature mmu-miR-295-3p

• Accession: MIMAT0000373
• Description: Mus musculus mmu-miR-295-3p mature miRNA
• Sequence: 43 - AAAGUGCUACUACUUUUGAGUCU - 65
• Evidence: experimental ; cloned [1-2], Northern [1], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12919684
   Embryonic stem cell-specific MicroRNAs
   "Houbaviy HB, Murray MF, Sharp PA"
   "Dev Cell (2003) 5:351-358


3. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


4. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009