Accession
MI0000499
Description
Caenorhabditis briggsae
cbr-mir-45-2 precursor miRNA
Sequence
483596
reads,
46474.0
reads per million, 3 experiments
agugccacgCUGGAUGUGUUCGUUAGUCAUAguaaccucaucaauucaggcuuaUGACUAGAGACACAUUCAGCUuggcgcc
.((((((.(((((((((((.(.((((((((((...(((.........))).)))))))))).)))))))))))).)))))).
.((((((.(((((((((((.(.((((((((((...(((.........))).)))))))))).)))))))))))).)))))).
Structure
a c U G uaa cau gugcca gCUGGAUGUGU C UUAGUCAUAg ccu c |||||| ||||||||||| | |||||||||| ||| a cgcggu CGACUUACACA G GAUCAGUauu gga a c U - A --c cuu
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.
Genome context
chrII: 8903145-8903226 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-45-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-45-2-5p
| Accession | MIMAT0053518 |
| Description | Caenorhabditis briggsae cbr-miR-45-2-5p mature miRNA |
| Sequence | 10 - CUGGAUGUGUUCGUUAGUCAUA - 31 |
| Evidence | not_experimental |
Mature cbr-miR-45-3p
| Accession | MIMAT0000470 |
| Description | Caenorhabditis briggsae cbr-miR-45-3p mature miRNA |
| Sequence | 55 - UGACUAGAGACACAUUCAGCU - 75 |
| Evidence | not_experimental |
References
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