Accession
MI0000500
Description
Caenorhabditis briggsae
cbr-mir-46 precursor miRNA
Sequence
60567
reads,
6008.0
reads per million, 3 experiments
gagauacaagugaagcugAAGAGAGCCGUCUAUUGACAGUUcgcuuguuucaugugcUGUCAUGGAGUCGCUCUCUUCAgaugaucugaaucua
.((((.((.((....(((((((((((..(((((.((((((..((.((...)).)))))))))))))...)))))))))))...)).)).)))).
.((((.((.((....(((((((((((..(((((.((((((..((.((...)).)))))))))))))...)))))))))))...)).)).)))).
Structure
g a a gaag -CG U Uc u u agau ca gu cugAAGAGAGC UCUAU GACAGU gc ug |||| || || ||||||||||| ||||| |||||| || || u ucua gu ua gACUUCUCUCG AGGUA CUGUcg ug ac a a c -gua CUG - -- u u
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.
Genome context
chrIII: 5569417-5569510 [-]
Database links
Mature cbr-miR-46-5p
| Accession | MIMAT0053519 |
| Description | Caenorhabditis briggsae cbr-miR-46-5p mature miRNA |
| Sequence | 19 - AAGAGAGCCGUCUAUUGACAGUU - 41 |
| Evidence | not_experimental |
Mature cbr-miR-46-3p
| Accession | MIMAT0000471 |
| Description | Caenorhabditis briggsae cbr-miR-46-3p mature miRNA |
| Sequence | 58 - UGUCAUGGAGUCGCUCUCUUCA - 79 |
| Evidence | not_experimental |
References
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