Accession
MI0000502
Description
Caenorhabditis briggsae
cbr-mir-48 precursor miRNA
Sequence
agaaccauucgggauguUGAGGUAGGCUCAGUAGAUGCGAggagauccaccauuccucacaucgucuguccuaacucgccuucccuugugcuuca
.(((.(((..((((.(.((((.((((..(((..((((.((((((........)))))).))))..))).)))).)))).).))))..))).))).
.(((.(((..((((.(.((((.((((..(((..((((.((((((........)))))).))))..))).)))).)))).).))))..))).))).
Structure
a c uc u u G CU UA C auc gaa cau ggga g UGAG UAGG CAG GAUG GAggag c ||| ||| |||| | |||| |||| ||| |||| |||||| cuu gug cccu c gcuc aucc guc cuac cuccuu a a c uu u c a -u ug a acc
Annotation confidence
Low
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.
Genome context
chrV: 14733130-14733224 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-48
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-48
| Accession | MIMAT0000473 |
| Description | Caenorhabditis briggsae cbr-miR-48 mature miRNA |
| Sequence | 18 - UGAGGUAGGCUCAGUAGAUGCGA - 40 |
| Evidence | not_experimental |
References
|
