Accession
MI0000503
Description
Caenorhabditis briggsae
cbr-mir-49 precursor miRNA
Sequence
25552
reads,
2462.0
reads per million, 3 experiments
accgaaaccauuugccaucCGCAGUUUUUUGUAGUGUGCUCCGcgccaucuuagugcccgAAGCACCACGAGAAGCUGCAGAuggaaguuuugguu
((((((((......(((((.((((((((((((.(.(((((.((.(((......).)).)).)))))))))))))))))).)))))..)))))))).
((((((((......(((((.((((((((((((.(.(((((.((.(((......).)).)).)))))))))))))))))).)))))..)))))))).
Structure
- cauuug C A U C c - au accgaaac ccauc GCAGUUUUUUGU G GUGCU CG gc c c |||||||| ||||| |||||||||||| | ||||| || || | ugguuuug gguAG CGUCGAAGAGCA C CACGA gc cg g u u ----aa A - - A c u au
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.
Genome context
chrX: 3523210-3523305 [-]
Database links
Mature cbr-miR-49-5p
| Accession | MIMAT0053522 |
| Description | Caenorhabditis briggsae cbr-miR-49-5p mature miRNA |
| Sequence | 20 - CGCAGUUUUUUGUAGUGUGCUCCG - 43 |
| Evidence | not_experimental |
Mature cbr-miR-49-3p
| Accession | MIMAT0000474 |
| Description | Caenorhabditis briggsae cbr-miR-49-3p mature miRNA |
| Sequence | 61 - AAGCACCACGAGAAGCUGCAGA - 82 |
| Evidence | not_experimental |
References
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