Accession
MI0000504
Description
Caenorhabditis briggsae
cbr-mir-50 precursor miRNA
Sequence
41208
reads,
5055.0
reads per million, 3 experiments
uuccacccaccggccgcUGAUAUGUCUGAUAUUCUUGGGUUaucugauaaugauuguuguaaCUCAAGUAUUAGACGUAUCGACggccggcuggguuggaa
.(((((((((((((((.((((((((((((((..((((((((((..(((((...))))))))))))))))))))))))))))).))))))).)))).)))).
.(((((((((((((((.((((((((((((((..((((((((((..(((((...))))))))))))))))))))))))))))).))))))).)))).)))).
Structure
u - - c UU cu u ucca ccca ccggccg UGAUAUGUCUGAUA CUUGGGUUau gauaa |||| |||| ||||||| |||||||||||||| |||||||||| ||||| g aggu gggu ggccggC GCUAUGCAGAUUAU GAACUCaaug uuguu a u c A -- -- a
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1]. The expression of this miRNA has not been verified in C. briggsae.
Genome context
chrI: 2597949-2598049 [+]
Database links
Mature cbr-miR-50-5p
| Accession | MIMAT0000475 |
| Description | Caenorhabditis briggsae cbr-miR-50-5p mature miRNA |
| Sequence | 18 - UGAUAUGUCUGAUAUUCUUGGGUU - 41 |
| Evidence | not_experimental |
Mature cbr-miR-50-3p
| Accession | MIMAT0053523 |
| Description | Caenorhabditis briggsae cbr-miR-50-3p mature miRNA |
| Sequence | 63 - CUCAAGUAUUAGACGUAUCGAC - 84 |
| Evidence | not_experimental |
References
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